Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00025 ATGGGAAGGAGTTGGAGTCCAATGCTCCAAAGAGAGATCCAAAATCTTGACAAAGATGCAGATAGTCGCAAATCTGCAATGAGAGCATTGAAGTCGTATGTGAAAGATCTGGACATGAAGACAATTCCTATCTTTCTTGCTCAAGTTTCCGAGACCAAGGAAACTGGTTCTTTGTCTGGAGAATTCACAATTTCACTTTACGAGGTTCTTGCTCGGGTTCATGGAGTCAAGATTGTTCCCATGATAGACATTATTATGCAATCCATAATTCAGACCTTAACTTCAAGTGTAGGCTCTTTTCCTCTTCAGCAGGCGTGCTCAAAGGTTGTTCCAGCCATAGCAAGGTATGGAATTGACCCCACAACACCAGAAGAGAAGAAGAGGCAAATAATTCACTCTCTTTGTAAGCCCCTTTCAGGTTCTCTCTCAAATTCTCAAGAGAGTTTGGCATGTGGTGCAGCCCTTTGCTTGAAGGCTCTTGTGGATTCAGATAATTGGCGTTTCGCCTCAGATGAGATGGTTAATAGGGTTTGCCAGAATGTTGCTGCGGCATTGGAGGGAAAGTCTACTCAAACCAATTCACACATGGGTCTTGTTATGACCCTGGCGAAGCGTAATGCTTTGATTGTTGAAGCCTATGCTAGATTGCTCATACAATCTGGATTGCGAATACTAAATGCTGGCGGTGAGCCTTTGGAGGGAAATTCTCAGAAGCGGTTTGTAGCCATTCAAATGGTGAACTTTTTGATGAGATGTCTAGATCGCAGGAGCATATTTTCGGAGGTTGAACAGATAATTGAGGTGATGGAGCTGGCTCAATCAGACAAAATGGCATATGTCAAAGGAGCTGCATTTGAGGCTTTGCAAACAGCTAAGGTGATTTTGACTGATAAAAAATCAAGAGGTGTGAAGACTCCTGCTTCTGTGACGGGTTCAAATTTCAGTAGGAAAGACTTTATGGAGGGAGAAAGTTTTTCTGGTGGAGACTGTTCTCCATCATCTATTTCCCCTGAGTCACGTACCAGTACCTGGGACTTCTTCAATAGATTTGCATCCCCTGTTGGGTCTCCCATTTTAACTAGTCTGCCTTCTCAAAACTTCTACGAGCGAAGGAGTGTGAATAGGAAGCTTTGGAGTCTTGAAAATGGAGAGGTTGATGTGTCTCTCAAGGATGGTTTGTTCTCAAAGTCAGGGCATGGAAATGCTTCTTTTGAGCACACTATGGATCATGAATTTTCTAATGGAGGGCGAGATTTAACAGGAGAGTTTACTGTTTTCACGCACAAAAGTCCTTGGCGTGGAGCGTCTAGAACTGCTAGCAAAAGTCCTCGAAAATCTCTCACGCAGGAGAACTTCAAAATTTTTATGACTCCTAGAAAGCTCATTCACTCTCTTCAAGACCCAAATGATGAGATTTCAGATTGCTCTGAGAAACCGAATAGAAGGATCAAGAGTCTATCATCAGGCAATATTATGTGGAGTCCAGCATCTTTTTCAGAATATGATCAAAATGGTATTGCAGATCTCGTCAAGTGTGATTCTGAAGAGAATGGAGGCTTATACTGTGATGATCAGTCTCAAGGTGGACTGGAGTCAGTCTCATCAACTGATGACAATCTTGTTAACTCTGATATGCAGAGGAGGTCTTCCGAGGTTGGCCATGATAGGGGAAATGGTACTGAAACAGTGCTCGTGGGAAAGCCATTTCAAAAGACTAAGCATAAATTAGTTTATGGCATTTCTTTTGCCCTTCTTGCAATAGCAACTCCTTTACTCTGGATCAACAGTCAGGATGAAGACCATTTTCTTGTCCCGACATAA 1821 0.4267 MGRSWSPMLQREIQNLDKDADSRKSAMRALKSYVKDLDMKTIPIFLAQVSETKETGSLSGEFTISLYEVLARVHGVKIVPMIDIIMQSIIQTLTSSVGSFPLQQACSKVVPAIARYGIDPTTPEEKKRQIIHSLCKPLSGSLSNSQESLACGAALCLKALVDSDNWRFASDEMVNRVCQNVAAALEGKSTQTNSHMGLVMTLAKRNALIVEAYARLLIQSGLRILNAGGEPLEGNSQKRFVAIQMVNFLMRCLDRRSIFSEVEQIIEVMELAQSDKMAYVKGAAFEALQTAKVILTDKKSRGVKTPASVTGSNFSRKDFMEGESFSGGDCSPSSISPESRTSTWDFFNRFASPVGSPILTSLPSQNFYERRSVNRKLWSLENGEVDVSLKDGLFSKSGHGNASFEHTMDHEFSNGGRDLTGEFTVFTHKSPWRGASRTASKSPRKSLTQENFKIFMTPRKLIHSLQDPNDEISDCSEKPNRRIKSLSSGNIMWSPASFSEYDQNGIADLVKCDSEENGGLYCDDQSQGGLESVSSTDDNLVNSDMQRRSSEVGHDRGNGTETVLVGKPFQKTKHKLVYGISFALLAIATPLLWINSQDEDHFLVPT 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00025 606 SUPERFAMILY ARM repeat 7 290 IPR016024 -
Vimu8g00025 606 Gene3D - 7 298 IPR011989 -
Vimu8g00025 606 FunFam protein SINE1 isoform X1 2 316 - -
Vimu8g00025 606 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 6 450 IPR033337 GO:0005874|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00025 Vimu-Chr8 2363798 2366567 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00025 - - pvu:PHAVU_004G079400g 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03457 6 31313951 31316146 Vimu8g00025 8 2363798 2366567 PCT