Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03457 ATGAGGATGGGAAGGAGTCTCAGCCCTTTGGTGCGGCAAGAGCTGGCAAATCTTGACAAAGATGAAGAAAGTCGCAAGTCCGCCATGAAAGCACTGAAATCCTACGTGAAAGATTTGGACTTCAAGGCCATTCCTGTGTTTCTTGCCAAATTTTCAGAGAGCAAGGAAAGTGGTTCTGAGGAATTCTCAATATCAATCTATGAGATTCTTGTACGGGTTCATGGTGTCAAAATTGTTCCCTTGATTGATACAATCATGAAAACCATAGTCAAGACTTTGGCTTCAAGCGCTGGGTCTTTCCCTCTCCAACAAGCTTGTTCAAAGGTGGTTCCTGCAATTGCAAGATATGGAATTGACCCCTCAACCCCTGAAGATAAAAAGAGGAGCATAATTCAATCCCTTTGCATGCCACTTTCTGATTCTCTCGCGAGTTCTCAGGAGGGCCTAACTTCGGGTGCTGCACTTTGCTTGAAGGCTCTCGTGGATTCAGAAAACTGGAGGTATGCTTCTGATGAATTGGTGAATAGGGTTTGCCAGAATATTGCTGTGGCATTAGAAGGGAAGTCTGGTCAAACCAACTCACACATGGGTCTTGTTATGTCCTTGGCCAAGCGCAATGCTTTGATCATTGAAGCATATGCAAGGTTGCTCATACAATCTGGAATAAGAATAGTGAATGCTGGTCTTGTGGAGGGAAATTCTCAGAAAAGGCTTTCATCCATTCAGATGGTCAATTTCTTGATGAGAAGTTTGGATTCCAGGAGCATATTCTCAGAGGTTGAATTCATAATTGAGGAGTTGGAGAAGTGCCAATCTGACAAAATGGCATTTGTCCAAGGTGCAGCACTCGAGGCTTTGCAAACTGCCAAGAGAATTGCAAGTGATAAAAGGCCAAGGTATGCAAAAAGTCCTTCTTCAGTGACAGGGTCGAATTTTAGTACGAGAGAAGGAGAACATACTTCTTCAGGCGAGGGAGATAATACTTCTTCTACACCTTCCTCTATTTCACCAGAATCTCGCACTTTGGACTTTTTCCCTGGATATGAATTCACCGAGTCTCCTATTTCAAGCAACTTGGACTATGAAAGAAGAAGCGTGACCAGGAAGCTTTGGAGTAATGAAAATGGAGGTGTTGATGTGTCCCTGAAGGATGGGTTGTTCTCACAAGTAGGAAAGGAAAGTGCTTTGTCAGAGCATTCATTGATTCACGAGTTTTCCAATGGAGATGGATATTATACAGAGGAGTTTGCTGGTTTCATGCCCAGAAATCCCAGGCATGGAGTATCCAAAAGCACCACCACAAGTCCCCTTAGGTCACGCACTCAGGCGACCATTGACAGCATTAAAATCTTCGAGACCCCTAGAAAACTCATTCACTCTCTTCAAGATTCAAGTGATTTGACTTTTGATTGCTCTAAGAAACAGAATAGAATGTTCAAGAGCCTATCTTCAGGCAACATTGAGTGGAGTCCTGGTTCTAAATATGATCAGAACGGTTTCTCAAATGATGTGAAGTGTGATAGTGAAGTAATTGAAAGTTGTGGTGAGGCTGAGTTTCAAGTTAGCTCAGAGTCCGTGTCATCATCAGATGACCTTCCTGTAGATGCCAATAAGCAGATGTCAACCAAAGTGGTTCCTGAAAACAGAAATATTACACCAACTGCACAACGAAAGACTAAATACAAATTGGTTTGTGGTCTTTCATTTGTTGTTCTTGCAGTGGCTACTCCTTTACTTTGGATCAATACTCAGGATGAAGGCCATTATCTTGTACCAACTTAA 1782 0.4265 MRMGRSLSPLVRQELANLDKDEESRKSAMKALKSYVKDLDFKAIPVFLAKFSESKESGSEEFSISIYEILVRVHGVKIVPLIDTIMKTIVKTLASSAGSFPLQQACSKVVPAIARYGIDPSTPEDKKRSIIQSLCMPLSDSLASSQEGLTSGAALCLKALVDSENWRYASDELVNRVCQNIAVALEGKSGQTNSHMGLVMSLAKRNALIIEAYARLLIQSGIRIVNAGLVEGNSQKRLSSIQMVNFLMRSLDSRSIFSEVEFIIEELEKCQSDKMAFVQGAALEALQTAKRIASDKRPRYAKSPSSVTGSNFSTREGEHTSSGEGDNTSSTPSSISPESRTLDFFPGYEFTESPISSNLDYERRSVTRKLWSNENGGVDVSLKDGLFSQVGKESALSEHSLIHEFSNGDGYYTEEFAGFMPRNPRHGVSKSTTTSPLRSRTQATIDSIKIFETPRKLIHSLQDSSDLTFDCSKKQNRMFKSLSSGNIEWSPGSKYDQNGFSNDVKCDSEVIESCGEAEFQVSSESVSSSDDLPVDANKQMSTKVVPENRNITPTAQRKTKYKLVCGLSFVVLAVATPLLWINTQDEGHYLVPT 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03457 593 MobiDBLite consensus disorder prediction 294 341 - -
Vimu6g03457 593 FunFam protein SINE1 isoform X1 4 314 - -
Vimu6g03457 593 Gene3D - 5 317 IPR011989 -
Vimu6g03457 593 MobiDBLite consensus disorder prediction 301 340 - -
Vimu6g03457 593 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 357 IPR033337 GO:0005874|GO:0008017
Vimu6g03457 593 SUPERFAMILY ARM repeat 15 293 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03457 Vimu-Chr6 31313951 31316146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03457 - - gmx:102659858 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03457 6 31313951 31316146 Vimu6g03457 6 31313951 31316146 ECH
Vimu6g03457 6 31313951 31316146 Vimu8g00025 8 2363798 2366567 PCT