Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00021 ATGGGAAAAGGGTGGTTTTTGAGATGGGTTTTTGCAGTGATTGGGGTGATGAGTTGGTGGGGTGTGGAAGGGCTTGGGGTGAACTGGGGGACTCAAGCCACACACCAGTTGAGAGCAGACACTGTGGTTGAGATGTTGAAGGACAATGGGATTCAAAAGGTGAAGCTGTTTGATGCAGATGAGTCTTGCATGAAGGCTCTATCTAGGTCAGCGATTGAAGTCATGGTTGCCATTCCCAATAACCAACTTTCTGAGATGAATGACTATGATCGTGCCATGCAGTGGGTGAAGAAGAATGTCACAAGTTACAACTTCAGGGGTGGAGTTAACATCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTGAAATCCTACAATGGCTCATTGATGCAAGTCACCTTCCCTGCACTACAGAACATTCAGAATGCCCTCAATGAAGTTGGTGTAGGAGACTACATAAAAGCCACAGTGCCCTTAAATGCTGATGTGTATGAGTCTCCAATAAACAACCCTGCTCCATCAGGTGGAATGTTTAGGCCTGATATAAGTGACCTAATGATTCAAATTGTGCAATTTTTGGCCAAGAACAATGCACCATTCACAGTGAACATTTACCCCTTCTTGAGCCTCTATGGGAATGACAATTTCCCTTTTGACTATGCCTTCTTTGATGGGGTAGCTAACCCCATAAATGATAATGGGGTTTCATACACCAATGTCTTTGATGCAAACTTTGACACCTTGGTCTCTGCCCTCCAAAAAGTGGGGTATGGAGACATGCCAATTCTGGTAGGAGAGGTAGGATGGCCAACAGATGGTGACAAAAATGCCAATGTAGGCAATGCGTTTAGGTTCTACAATGGACTTCTACCGAAGCTTGCATTGAACAGAGGGACCCCACTTAGGCCAAAATATATTGAAGTTTATCTTTTTGGCCTCATTGATGAGGATGCCAAAAGCATTGCCCCAGGGAACTTTGAACGCCATTGGGGAATTTTCAAGTATGATGGAAAGCCTAAGTTTCCAATGGACCTTTCTGGAAAAGGCCAAAACAAGTCACTAGTTGGTGCTCAAAATGTGTACTATCTTGATCCAAAGTGGTGCATGTTCAACCCTGATGCACAGAACCTAAGCAAACTTGCTGATAACATAAACTATGCTTGCACCCTTGCTGATTGCACTGCACTTGGATATGGATCTTCTTGCAACAACTTGGATGCAAATGGGAATGCCTCTTATGCATTTAACATATATTACCAGACACAGGATCAGAATGACTTGTCCTGCAATTTTGAAGGTTTGGCAAGGCTTACAACAAGCAACATTTCAACACCAACTTGCAACTTTATTGTTCAGATAAATCCTTCCCTTTCCCCTTCTTTGAGGCCATCAATAGTCGCTTTCTTATCAATCACTCTTCTACCCTTGATTTTAATGTTGTAG 1443 0.431 MGKGWFLRWVFAVIGVMSWWGVEGLGVNWGTQATHQLRADTVVEMLKDNGIQKVKLFDADESCMKALSRSAIEVMVAIPNNQLSEMNDYDRAMQWVKKNVTSYNFRGGVNIKYVAVGNEPFLKSYNGSLMQVTFPALQNIQNALNEVGVGDYIKATVPLNADVYESPINNPAPSGGMFRPDISDLMIQIVQFLAKNNAPFTVNIYPFLSLYGNDNFPFDYAFFDGVANPINDNGVSYTNVFDANFDTLVSALQKVGYGDMPILVGEVGWPTDGDKNANVGNAFRFYNGLLPKLALNRGTPLRPKYIEVYLFGLIDEDAKSIAPGNFERHWGIFKYDGKPKFPMDLSGKGQNKSLVGAQNVYYLDPKWCMFNPDAQNLSKLADNINYACTLADCTALGYGSSCNNLDANGNASYAFNIYYQTQDQNDLSCNFEGLARLTTSNISTPTCNFIVQINPSLSPSLRPSIVAFLSITLLPLILML 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00021 480 Pfam X8 domain 366 435 IPR012946 -
Vimu8g00021 480 Gene3D Glycosidases 24 352 - -
Vimu8g00021 480 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Vimu8g00021 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 438 IPR044965 GO:0004553|GO:0005975
Vimu8g00021 480 FunFam Glucan endo-1,3-beta-glucosidase 5 24 351 - -
Vimu8g00021 480 Gene3D - 363 457 - -
Vimu8g00021 480 SMART X8_cls 366 449 IPR012946 -
Vimu8g00021 480 FunFam Glucan endo-1,3-beta-glucosidase 8 362 458 - -
Vimu8g00021 480 Pfam Glycosyl hydrolases family 17 25 344 IPR000490 GO:0004553|GO:0005975
Vimu8g00021 480 SUPERFAMILY (Trans)glycosidases 25 344 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00021 Vimu-Chr8 2272906 2276168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00021 15 453 Miscellaneous Gene Families AT2G19440 72.210 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00021 - - gmx:102666963 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03462 6 31384923 31387596 Vimu8g00021 8 2272906 2276168 PCT