Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03837 ATGTTTCTTCAAATTACTGTGAAGATTCAGGACTATTGGTTTCTTCATAGGATCATCAAAATGAAAAAGTTGTATGGAGGAGTTCTGGTCGCATCGCTCTTTATGTTGTTTATGCTTATGTTCCTGCGAAATGGTATCATGAAAACTCCTATTGGTCAAGGTTATTTGACTATTCCTATCCTGGTTAATGGAACTAATCCTCTAGCATGGATAAATCCCACAGTACCACCCGCTATTCAAAATCCAGAAGATCATTCTAAAGTTATTTCTTCTGATATTCTAGTATCTAGCCTCTTTGCTGGGAGCAACTTTTCCGAAGACGAGCAACAAGCTCTGCAGACATGGAAGCAATTGAACCACTTAATTGATCACACTCAGGGTTTACCCAGTTCCGCAGAAGCTATAAAGGAGGCTGCCAGTGCATGGAATTCTCTTATTTCCTCAATTGAAGAGCAAAAATACGGTCGTGCAAATGACAGTTCAAGAACCAAAGAGAAGCAGTGTCCCCACTTTCTTAATAAAATGAATTCCACCGAACTTGGTAACAGTAGTTACAAAATGCAAGTACCTTGTGGCCTAACACAAGGTTCTTCCATCACTGTAATTGGCATTCCGAACGGTCTTTTAGGTAATTTCCGGATTGACTTGACTGGAGAACCACTACCTGGGGAACCCGATCCTCCAATTATTTTACATTATAATGTTCGCTTGCATGGGGATAAAATCACTGAAGATCCTGTAATTGTCCAAAACACCTGGACTATAGCTCATGATTGGGGTGAAGAGGATCGTTGTCCATCCCCTACTCCTGAAAAGGTCGAGAAAGTTGATGAATTGGAGCAGTGTAATAAGATTGTAGGGAAGAACATTAGCCAACTTCACACAGCTGGCATGCATTCCCGCACTTCAAGACAATCTTTAGCAGCCGAAGAACAATCGATAAATAGGAAATATTTTCCTTTTAAACAGGGTTTACCATTTGTGGCAACTTTAAGAGTGGGATCTGAGGGAATCCAGATGACAGTTGATGGAAAACACATAACTTCATTTGCTTTTCGTGAAACTTTGGAGCCATGGCTTGTCAGTGAAATAAAAATCTCTGGGGACCTCAAATTAATATCTATTCTTGCTAGTGGTCTGCCCACATCAGAGGATTCAGAGCATATTATTGACCTAGAATCATTAAAATCAAGTCCTATATCTGCACAAATCGCATTGGATCTCTTCATTGGTGTTTTCTCTACTGCTAACAATTTTAAGCGTCGAATGGCCGTAAGAAGAACTTGGATGCAGTATAATGCTGTTCGATCAAATAAGACAGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCCCAATAGTTAATGAAGAGTTGTGGAGGGAAGCACAAACTTATGGAGACGTGCAGCTGATGCCATTTGTTGACTACTACAGCCTAATCACATGGAAAACTTTAGCAATCTGCATTTTTGGGACACAAGTTTCGGCAAAGTTTGTCATGAAGACGGATGATGATGCGTTTGTCCGGGTAGATGAAGTTCTAGACTCTTTGCATAAGATCAATGTTGATCATGGGTTACTATATGGACTCATCAATTCGGATTCCAGACCTCATCGAAATACAGATAGCAAATGGTACATCAGCCCAGAGGAATGGAGCGAAGGAACTTATCCTCCATGGGCACATGGTCCCGGCTACGTGGTCTCACTCGACATAGCAAGAACGGTGGCCAAGAAATTCAGAGAGAACCATTTGAAGATGTTTAAATTAGAAGACGTTGCAATGGGAATCTGGATCGCAGACATGAAGAAGGAAGGTGTAGAAGTTCGGTATGAGAATGAGAACAGAGTGTATCCTGAAGGTTGTAAGGATGGTTATGTGGTTGCCCATTACCAGGGCCCAAGGGAGATGCTCTGTTTGTGGCAGAAACTTGAGGAAGGAAAAGGTGCAAAATGCTGTGGTGATAGGAGATGA 1974 0.4144 MFLQITVKIQDYWFLHRIIKMKKLYGGVLVASLFMLFMLMFLRNGIMKTPIGQGYLTIPILVNGTNPLAWINPTVPPAIQNPEDHSKVISSDILVSSLFAGSNFSEDEQQALQTWKQLNHLIDHTQGLPSSAEAIKEAASAWNSLISSIEEQKYGRANDSSRTKEKQCPHFLNKMNSTELGNSSYKMQVPCGLTQGSSITVIGIPNGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNTWTIAHDWGEEDRCPSPTPEKVEKVDELEQCNKIVGKNISQLHTAGMHSRTSRQSLAAEEQSINRKYFPFKQGLPFVATLRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEIKISGDLKLISILASGLPTSEDSEHIIDLESLKSSPISAQIALDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNKTAVRFFVGLHKSPIVNEELWREAQTYGDVQLMPFVDYYSLITWKTLAICIFGTQVSAKFVMKTDDDAFVRVDEVLDSLHKINVDHGLLYGLINSDSRPHRNTDSKWYISPEEWSEGTYPPWAHGPGYVVSLDIARTVAKKFRENHLKMFKLEDVAMGIWIADMKKEGVEVRYENENRVYPEGCKDGYVVAHYQGPREMLCLWQKLEEGKGAKCCGDRR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03837 657 CDD GLECT 185 375 IPR001079 GO:0030246
Vimu7g03837 657 SMART Gal_bind_lectin_2 189 377 IPR001079 GO:0030246
Vimu7g03837 657 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 185 378 IPR001079 GO:0030246
Vimu7g03837 657 FunFam Beta-1,3-galactosyltransferase GALT1 399 627 - -
Vimu7g03837 657 Pfam Galactoside-binding lectin 185 376 IPR001079 GO:0030246
Vimu7g03837 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 185 378 IPR013320 -
Vimu7g03837 657 Gene3D - 404 619 - -
Vimu7g03837 657 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 344 610 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu7g03837 657 Pfam Galactosyltransferase 420 603 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu7g03837 657 Gene3D - 177 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03837 Vimu-Chr7 34761591 34765169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03837 21 653 Glycosyltransferase AT1G26810 62.928 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03837 K14413 - gmx:100782548 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03837 7 34761591 34765169 Vimu7g03837 7 34761591 34765169 ECH
Vimu7g03837 7 34761591 34765169 Vimu10g01134 10 10885457 10888613 PCT