Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03773 ATGGGGAATTGCCAAGCTGTGGATGCTGCAGTGCTTGTCATCCAACACCCTTGTGGGAAGATAGAGAGGTTGTATTGGCCAGTCTCTGCAAGTCAGGTTATGAGGACCAACCCAGGTCACTATGTGTCTTTGATAATACCATTGCCTGTGCCACCACAGGACCAGAATCAAGACCACAAAACGGTGCGTTTCACCCGAGTTAAGCTCCTTCGGCCTAATGAAACTCTCAACCTTGGCCATGCCTATAGGCTCATCACCACTCAAGGTATATCATGCTATCAGATCTTTCTGATGATTGTACTTTTTGTGTGTTTTTGA 318 0.4654 MGNCQAVDAAVLVIQHPCGKIERLYWPVSASQVMRTNPGHYVSLIIPLPVPPQDQNQDHKTVRFTRVKLLRPNETLNLGHAYRLITTQGISCYQIFLMIVLFVCF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03773 105 PANTHER EXPRESSED PROTEIN 1 89 - -
Vimu7g03773 105 Pfam PADRE domain 1 87 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03773 Vimu-Chr7 33323341 33323658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03773 - - gmx:100782731 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03773 7 33323341 33323658 Vimu7g03773 7 33323341 33323658 ECH
Vimu7g03773 7 33323341 33323658 Vimu11g02569 11 45385493 45386832 PCT
Vimu7g03773 7 33323341 33323658 Vimu10g01169 10 11377523 11378388 PCT