Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01169 ATGGGAAATTGCCAAGCCATTGATGCAGCAACACTGGTGATTCAGCATCCGAATGGGAAAGTTGACAAGTTTTATGCACCTGTGAGTGCCACACATGTAATGAAAACCAACCCTGGTCACTATGTTGCTCTTCTCATCTCCTCCACCACATTGTGTCCAACCAAACACATTCAAAATTGCCCCAATAAGACTGACCACAAAGCTAATATCAACAACAACAACAACCCAGTTCGTTTAACTCGCATCAAGCTTCTCAAGCCCACCGACAACCTTCTTCTTGGTCAAGTTTATAGGCTCATCACAACAAAAGAGGTCATGAAGGGTCTCAGGGAAAAGCAAAAGGCAAAGATGAGGCAGAACGTAGTAGAGCCAGATTTGGAGAAGGAGAAACTGCCAAGGAGGCCTGATATCGAGGACAATAAGGTAATGGCGAAAGCTGAAAGAGGTCGAGCAAGGATAACAGCACCAACTAATAATGGTGGTAGTGCCACAGCTAAGACAAGATTTTGGCAACCTTCTTTACAAAGTATCTCAGAGTCTGCCAGCTGA 549 0.4463 MGNCQAIDAATLVIQHPNGKVDKFYAPVSATHVMKTNPGHYVALLISSTTLCPTKHIQNCPNKTDHKANINNNNNPVRLTRIKLLKPTDNLLLGQVYRLITTKEVMKGLREKQKAKMRQNVVEPDLEKEKLPRRPDIEDNKVMAKAERGRARITAPTNNGGSATAKTRFWQPSLQSISESAS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01169 182 MobiDBLite consensus disorder prediction 131 182 - -
Vimu10g01169 182 Pfam PADRE domain 1 179 IPR025322 -
Vimu10g01169 182 MobiDBLite consensus disorder prediction 155 182 - -
Vimu10g01169 182 MobiDBLite consensus disorder prediction 131 148 - -
Vimu10g01169 182 PANTHER EXPRESSED PROTEIN 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01169 Vimu-Chr10 11377523 11378388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01169 - - gmx:100813476 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01169 10 11377523 11378388 Vimu10g01169 10 11377523 11378388 ECH
Vimu7g03773 7 33323341 33323658 Vimu10g01169 10 11377523 11378388 PCT