Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03714 ATGAACGAACAACTCACGCTGCTCTGTCTCTTTATCCTCTTCTCCTCTCTCAGTGTAAGCACACAGCTTTTCTTCACTGTCACTGTTACAAGTCTGGATTTTTTCTATTGTTTTATTCATGCCATTGCCACTTCTGAAAAGGGTCTTCTTCACTCAATGCAGGTTAGCTTCGCCGGGGTCGCCGACGGAGAAAAAAACCCGTTCACGCCCAAAGCCTACGCGATTCGCTATTGGGACAAAGAGATCCGCAGCTCGCTTCCCAAGCCTCCGTTTCTTTTGTCCAAGGCGTCGCCGCTTAGTGCGGCGGAGTCGGCGGCGTTCGTGAAACTCGCGGCTCAGAACGCTCTTGACCAGCGGCTGCCGGAATTCTGCGCCTCCGCGAAGCTTCTCTGCTTCCCGGAGGTGGGGTCGAGCTTTGAGAAGCACGACAAGGACGCGAACTTCGCTGTGTACAGAGACAAGAACTTCACCAACTACGGAACGGGTCGACCCGGTGGACTGGATTCGTTCAAGAACTACTCAGAAGGGGAGAATATTCCGGTGAATGATTTCCGGCGCTACAGCAGGGACTCCGCCGGGCACAAGGACAGTTTTTTGAGCTACAGCACCGATGGGAACGTGGTGCAGCAGAGCTTTCACACTTACGCCGCTGGAGCCACAGGCGGAGCCGGCGATTTCAAGCACTACTCTGAGGAGACCAACGTCCCGAACCTCGTTTTCACCTCTTACTCCGACGACGCCAACGGGAGAACCCAGTCGTTCACTTCTTACTCCGAAAACGGCAATGCCGGAGAACAATCGTTCTCCTCGTACGGTAAAAACGGTAACGGCCCAACCAATGCGTTCACCTCTTACGGGACAGGTTCCAACGTTGTGGGTTCCGGGTTCTCTAACTATGCTGAAAACACAAATGCTCCCAACGACACCTTCAAAGGCTACGGCGTCGACATGAACAACCCCACCAACACCTTCTCCAACTATGCTGCCGGCGGCAACGGCGCCGTCGAGAAGTTCTCCAATTACCGCGACAAGGCGAACGTGGGCGCCGACTCCTTCACCTCGTACGCAAAATCCGCAAACGCTGCCGACGTCGGTTTCAGCAACTACGGCAAATCCTTCAACGAAGGCACCGACAAGTTCACCTCGTACGCGAAATCCTCGACCGGCGGCACGAAGGTGGGTTTCACTTCCTACGGCGTGAACAACACCTTCAAGGAGTACTCAAAAGAAAGCGCCACTTTCTCGTTCGCGAAGTACACAAACGTGAGCACCACGCTGAGCGTTTCGGCTTCCGAGGCGAGTGGTAGGATGGTAAATAAGTGGGTGGAGCCGGGTAAATTCTTCAGGGAGGAGATGATGAAGGAAGGAACGGTGATGCCGATGCCTGACATAAGAGATAAAATGCCGGAAAGGTCGTTTTTGCCCCGGAGCATTTTGTCCAAATTACCGTTTTCCGTTTCCCAGATGGAGGAATTGAAGCGCATGTTCCGAGCCTCCGATAACGGTTCCATGGAGAGGATGATGCGCGAGAGCTTGGAGGAATGCGAGCGTGCGCCAAGTCGCGGCGAGACAAAACGGTGCGTTGGGTCTTTGGAGGACATGATCGACTTCGCCACGTCCGTTTTAGGGCGAAACGTCGTCGTTCGGAGTACGGAAAACGTGAATGGCTCGAAGAAGAGTGTGATGGTGGGACCCGTTAAGGGAATCAACGGTGGTAAAGTCACCCAATCCGTGTCCTGCCACCAGAGCCTGTTCCCGTACCTGCTCTATTACTGTCACGCTGTTCCTAAGGTTCGGCTCTACCAAGTGGATCTTCTCGACCCGAAATCGAAGAGCAAGATCAACCACGGCATTGCCATCTGTCACTTGGATACCTCCGATTGGAGCCCCACCCACGGAGCCTTTGTCTCGCTCGGGTCTGCTCCGGGTCAAATCGAGGTTTGCCACTGGATCTTCCAGAACGACATGGCCTGGACCATTGCCGATTGA 1989 0.5425 MNEQLTLLCLFILFSSLSVSTQLFFTVTVTSLDFFYCFIHAIATSEKGLLHSMQVSFAGVADGEKNPFTPKAYAIRYWDKEIRSSLPKPPFLLSKASPLSAAESAAFVKLAAQNALDQRLPEFCASAKLLCFPEVGSSFEKHDKDANFAVYRDKNFTNYGTGRPGGLDSFKNYSEGENIPVNDFRRYSRDSAGHKDSFLSYSTDGNVVQQSFHTYAAGATGGAGDFKHYSEETNVPNLVFTSYSDDANGRTQSFTSYSENGNAGEQSFSSYGKNGNGPTNAFTSYGTGSNVVGSGFSNYAENTNAPNDTFKGYGVDMNNPTNTFSNYAAGGNGAVEKFSNYRDKANVGADSFTSYAKSANAADVGFSNYGKSFNEGTDKFTSYAKSSTGGTKVGFTSYGVNNTFKEYSKESATFSFAKYTNVSTTLSVSASEASGRMVNKWVEPGKFFREEMMKEGTVMPMPDIRDKMPERSFLPRSILSKLPFSVSQMEELKRMFRASDNGSMERMMRESLEECERAPSRGETKRCVGSLEDMIDFATSVLGRNVVVRSTENVNGSKKSVMVGPVKGINGGKVTQSVSCHQSLFPYLLYYCHAVPKVRLYQVDLLDPKSKSKINHGIAICHLDTSDWSPTHGAFVSLGSAPGQIEVCHWIFQNDMAWTIAD 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03714 662 Pfam BURP domain 447 659 IPR004873 -
Vimu7g03714 662 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 54 662 - -
Vimu7g03714 662 ProSiteProfiles BURP domain profile. 447 661 IPR004873 -
Vimu7g03714 662 SMART BURP_2 445 661 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03714 Vimu-Chr7 32466009 32467997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03714 - - gmx:100797939 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03714 7 32466009 32467997 Vimu7g03714 7 32466009 32467997 ECH
Vimu7g03714 7 32466009 32467997 Vimu11g03243 11 52433129 52435182 PCT