Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03666 ATGTCTTGGATAGATTTGGTGGGAGACGTGTTTCCCCTGGAAGAATCAAAGCCTGGGAACACACACTTTTGTTTTGTTCGTGCAAGAACAAGAAGACAAGGCCAATGTGAACAAACTCACTCGGATTTGTCAATAGAAACAAGGAAGACAGATCTCTCAAGCATGAATTTTAGCTTTTGTTTGAGCTCCCCGATCATTTCCACACTTGTACATTTCCTTCTTGTTGTTTCTTTGCTTTGTCCTGTTTGTTCCTCAGAAATGGGCAACACCCCAGTTGCCAATCAGACTTTTAAGCCGCAAGAAGAGGTTCACAAGATGAACATCATAAGAACTCGTCTTCAGCAAATCAACAAGCCCCCTGTTAAGACAATTCAGAGTCCTGACGGTGATGTAATAGACTGTGTGGTGTCTCATCAGCAACCAGCTTTTGATCATCCTATGTTGAAGGGACACAAACCACTGGATCCTCCCGAAAGGCCTAAAGGTCATAACCAAAGGGACATATTGAGTGAGAATTTTCAGCTATGGACCATGTCAGGGGAGTCATGTCCAGAAGGTACAATTCCAATTAGAAGAACAAAAGAACAAGACATGTTAAGAGCTAGTTCTGTAAGCAGATTTGGAAGGAAAATAAGAAGGCGTGTTAGAAGGGACACCAGTAGCAATGGCCACGAGCATGCAGTTGGGTATGTGAGCGGAGAACAGTACTATGGAGCTAAGGCTAGCATAAACGTGTGGGCACCCCGTGTGGCAAATCAGGATGAATTCAGCCTGTCCCAAATGTGGGTCATATCTGGTTCATTTGGGGATGATCTCAACACTATTGAAGCTGGTTGGCAGGTCAGCCCTGAGCTCTATGGGGACAGATACCCCAGATTCTTTACTTATTGGACGAGTGATGCATATCAAGCAACTGGATGCTACAATTTACTGTGCTCAGGTTTTGTTCAAACTAACAATAAAATTGCAATTGGAGCTGCAATTTCTCCAACTTCTTCCTATGCTGGTGGGCAATTTGATATTAGTTTGCTGATTTGGAAGGATCCAAAGCATGGGAATTGGTGGCTTGAATTCGGATCCGGAATCTTAGTCGGGTATTGGCCATCGTTCTTGTTCACACACCTTAGGGATCATGCAAGCATGGTGCAATTTGGTGGAGAAGTGGTGAATTCAAGGCAATCAGGGTCTCACACTTCAACCCAAATGGGTAGTGGGCATTTTGCAAGTGAAGGGTTTGGAAAAGCTTCATACTTTAGGAATATGCAAGTTGTGGATTGGGACAACAACCTTGTACCCTTGTCAAATCTTAGGGTTCTAGCAGATCACCCCAATTGCTATGACATTCAAGGAGGGATTAATAATGTTTGGGGGAATTACTTTTACTATGGTGGACCTGGGAGAAATGTCAAATGTCCCTAA 1419 0.4362 MSWIDLVGDVFPLEESKPGNTHFCFVRARTRRQGQCEQTHSDLSIETRKTDLSSMNFSFCLSSPIISTLVHFLLVVSLLCPVCSSEMGNTPVANQTFKPQEEVHKMNIIRTRLQQINKPPVKTIQSPDGDVIDCVVSHQQPAFDHPMLKGHKPLDPPERPKGHNQRDILSENFQLWTMSGESCPEGTIPIRRTKEQDMLRASSVSRFGRKIRRRVRRDTSSNGHEHAVGYVSGEQYYGAKASINVWAPRVANQDEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDRYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNKIAIGAAISPTSSYAGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEVVNSRQSGSHTSTQMGSGHFASEGFGKASYFRNMQVVDWDNNLVPLSNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGRNVKCP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03666 472 Gene3D - 245 361 - -
Vimu7g03666 472 Pfam Neprosin 253 465 IPR004314 -
Vimu7g03666 472 Pfam Neprosin activation peptide 123 230 IPR025521 -
Vimu7g03666 472 FunFam Putative carboxyl-terminal proteinase 245 364 - -
Vimu7g03666 472 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 109 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03666 Vimu-Chr7 31794618 31798254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03666 - - gmx:100776639 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03666 7 31794618 31798254 Vimu10g01282 10 13100840 13105997 ECH
Vimu7g03666 7 31794618 31798254 Vimu7g03666 7 31794618 31798254 ECH
Vimu7g03666 7 31794618 31798254 Vimu10g01282 10 13100840 13105997 PCT