Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01282 ATGGTGTGGAGAAGAAGAGCTGGAAGAGAAGATCAAAGATGGAAGTACAACCCCACCATTGGGATCTATTTTATAAACTTGTTTCTGAATTTTTATGCTCACAAAAGAACAAGACAACAACCTCAATGGACACAACCAGACAATGATGGTGTCCCAGAAGAGACATGTGCACAACAAAACCATTCTCCAAAATTGGCTTCTTTCACTTCCCAAAATGCTCAACTTTTCATAACTATACCTTCTTTTGTTGCCTTGCTGCTCCTTGTTTCTTCAATTGCCCCAGCAATGTGCCAACCCCTGCAGGGTAACCACACTTTTAGGCCACAACATCAGCTCCTCAACTTGAGGAGAGTCAGAGCTCACTTGAAGAAGATTAACAAGCCTCCTAGTCCAGATGGTGATTTGATAGATTGTGTGTTATCTCACCAGCAACCTGCTTTTGACCATCCAAAGCTTAGAAATCACACACCATTGGATCCACCAGAGAGGCCAAGGGGAAAAAACCAGACCAAAGTAGATAGGGAAAGTGAGAGCTTTCAGCTGTGGAGTGATTCTGGTGAAACATGCCCAGAAGGAACTGTACCAATCAGAAGAACAACAGAGGAGGATATTCTCAGAGCAAGTTCTATCCGAAGATTTGGAAGAAAACCAAGAGCTGTACGGAGAGACTCATCTGGCAGTGGTCATGAGTTTGAACATGAGTTCCAAAAACAGCAGGTAACAGACAGTGAATGGACACCACTAGCAAAACATGCTGTTGTTTTCGTAAATGGGGATCAATACTATGGAGCAAGGGCAAGCATAAACGTGTGGGCACCAAGTGTGAGTGATGAATTTGAATTCAGCTTATCACAAATGTGGGTTATTGCTGGGTCCTTTGGTAAAGATCTGAACACCATAGAAGCTGGTTGGCAGGTGAGTCCACAACTGTATGGAGACAACTATCCAAGGTTCTTCACTTATTGGACAACCAACAATAGGGTAGCAATAGGAGCAGCAATCTCCCCAAGATCTTCTTACAACAGAAGACAGTTTGATATTAGCTTAATGATTTGGAAGGATCCAAAGCATGGACATTGGTGGTTGGAGTTTGGATCAGGTGTACTAGTGGGATATTGGCCAGCAAACATGTTCAGTCACTTGAGGAGTCATGCAAGCATGGTGCAATTTGGAGGAGAAATAGTGAACAGTGGTTCGAGGGGTTACCATACTGCGACACAAATGGGAAGTGGGCATTTTGCTGAAGAAGGATTCAGAAAAGCAGCATATTTTAGAAATTTGCAAGTGGTTGATTGGGACAATAGCTTGCTTCCTCTTAGAAACATTCATCATTTGGCTGATCATTCCAATTGCTACAACATAAGGCAAGGAAGCAGCAATGTTTGGGGAACTTACTTTTACTACGGTGGCCCTGGAAGAAATGTCAGATGCCCATGA 1437 0.4315 MVWRRRAGREDQRWKYNPTIGIYFINLFLNFYAHKRTRQQPQWTQPDNDGVPEETCAQQNHSPKLASFTSQNAQLFITIPSFVALLLLVSSIAPAMCQPLQGNHTFRPQHQLLNLRRVRAHLKKINKPPSPDGDLIDCVLSHQQPAFDHPKLRNHTPLDPPERPRGKNQTKVDRESESFQLWSDSGETCPEGTVPIRRTTEEDILRASSIRRFGRKPRAVRRDSSGSGHEFEHEFQKQQVTDSEWTPLAKHAVVFVNGDQYYGARASINVWAPSVSDEFEFSLSQMWVIAGSFGKDLNTIEAGWQVSPQLYGDNYPRFFTYWTTNNRVAIGAAISPRSSYNRRQFDISLMIWKDPKHGHWWLEFGSGVLVGYWPANMFSHLRSHASMVQFGGEIVNSGSRGYHTATQMGSGHFAEEGFRKAAYFRNLQVVDWDNSLLPLRNIHHLADHSNCYNIRQGSSNVWGTYFYYGGPGRNVRCP 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01282 478 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 118 474 - -
Vimu10g01282 478 MobiDBLite consensus disorder prediction 146 193 - -
Vimu10g01282 478 Pfam Neprosin activation peptide 130 231 IPR025521 -
Vimu10g01282 478 MobiDBLite consensus disorder prediction 148 180 - -
Vimu10g01282 478 MobiDBLite consensus disorder prediction 219 236 - -
Vimu10g01282 478 Gene3D - 273 351 - -
Vimu10g01282 478 Pfam Neprosin 280 326 IPR004314 -
Vimu10g01282 478 Pfam Neprosin 324 471 IPR004314 -
Vimu10g01282 478 MobiDBLite consensus disorder prediction 215 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01282 Vimu-Chr10 13100840 13105997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01282 - - gmx:100777828 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03666 7 31794618 31798254 Vimu10g01282 10 13100840 13105997 ECH
Vimu10g01282 10 13100840 13105997 Vimu10g01282 10 13100840 13105997 ECH
Vimu7g03666 7 31794618 31798254 Vimu10g01282 10 13100840 13105997 PCT