Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03661 ATGGTGGTGGCCACAGAGAAATCCAATGGCAGAAGTATTCCCGCAAGCAACATCTCCCCAAATACCATCATCGAACTTGAGAAAGGTGATCCAGTGGTGTTCGAAAAATACTGGAGAAAGAGGGGAGAGGAATGCAGCATAGTGATAAGAGGATGGGAGATGATGAGTTACGTTGGTGATGAGAAGAACAACGTGTGCTGGTACATGTTGCCGGAAGTTGAGAGAAGCATCAGAAGGTTGCATCACGTGGTGGGAAATGCTGTCACCCATGACAGATACATTGTGGTGGGGACAGGAGCCACGCAACTCTTCCAAGCTTCTGTCTTTGCTCTCTCTCCTTCACACCCTTCTAAACCTATCAATGTTCTTGCTGCTGCACCATTCTACTCGGAGTACCAAGATGAGATTAGTATTTTGCGTTCAGGGTTATACCAATGGGGTGGCGATGCTGCTTCGTATCAGAAAAACGAGCCTTACATAGAGGTGATAACCTCTCCAAATAACCCTGATGGGATTATTCGAGGACCTGTGGTGAAATCTGAGGCTAAAGGGAAACTGATTCATGATCTTGCATATTACTGGCCACATTACACTCCCATCACTCACCAAGCTGACCATGATCTCATGCTCTTCACATTCTCCAAATGCACTGGTCATGCTGGTTCACGTTTCGGGTGGGCACTGGTTAAGGACATTGAGGTAGCTAAGAAGATGACGAGGTATGTGCAGCTGAGCTCCATTGGAGTGTCAAAAGAAACTCAAACTCGAGTGGTTAAAATCATTGGAGTGGTTTGTGATGGATACCAAAACTTCGGGTCGATGGAGTCTGAGCTGTTCTTTGAATACAGCAAACGCCTCTTGAGGGAGAGGTGGCAAAAACTCTGGGCAGTTATTGATGAATCCAAGGTTTTCTCAGTGGCCAAGTATTCAAAGGCCGTTTGCAACTTCACCAATGAGTCATCTGAACCATCTCCTGGTTTTATATGGTTGAAGTGTGAGGAGGGCATAGAAGATTGTGAGAGTTATCTGCTGGAAAAACTGAAGGTTCGTGCAAGAGGAGGGAAACGGTTTGGTGTTGATTCAAAGTATGCTAGAATCAGCATGATCGGAACAGATGATGATTTCAATGAATTCCTGAAAAGGGTGTCAAATGCCAAGAAGGAATGA 1167 0.455 MVVATEKSNGRSIPASNISPNTIIELEKGDPVVFEKYWRKRGEECSIVIRGWEMMSYVGDEKNNVCWYMLPEVERSIRRLHHVVGNAVTHDRYIVVGTGATQLFQASVFALSPSHPSKPINVLAAAPFYSEYQDEISILRSGLYQWGGDAASYQKNEPYIEVITSPNNPDGIIRGPVVKSEAKGKLIHDLAYYWPHYTPITHQADHDLMLFTFSKCTGHAGSRFGWALVKDIEVAKKMTRYVQLSSIGVSKETQTRVVKIIGVVCDGYQNFGSMESELFFEYSKRLLRERWQKLWAVIDESKVFSVAKYSKAVCNFTNESSEPSPGFIWLKCEEGIEDCESYLLEKLKVRARGGKRFGVDSKYARISMIGTDDDFNEFLKRVSNAKKE 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03661 388 Gene3D - 71 269 IPR015421 GO:0003824
Vimu7g03661 388 Pfam Allinase 24 384 IPR006948 GO:0016846
Vimu7g03661 388 Gene3D - 10 65 IPR037029 GO:0016846
Vimu7g03661 388 Gene3D Aspartate Aminotransferase, domain 1 270 388 IPR015422 GO:0003824
Vimu7g03661 388 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 42 383 - -
Vimu7g03661 388 SUPERFAMILY PLP-dependent transferases 18 386 IPR015424 -
Vimu7g03661 388 CDD AAT_like 70 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03661 Vimu-Chr7 31719948 31724377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03661 K16903 - gmx:100801447 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03661 7 31719948 31724377 Vimu7g03661 7 31719948 31724377 ECH
Vimu7g03661 7 31719948 31724377 Vimu10g01295 10 13302697 13303298 PCT