Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01295 ATGGGTAGGTGGGCTCTTGTGAAAGACAAAGAAGTGGCAAAGAAAATGACAAAATTCATAGAGCTGAACACAATTGGAGTGTCTAAGGATTCTCAACTCAGGGCTGCTAAGGTTTTAAGGGCAGTTTCTGACAGCTGGGAACAAGGAAACTCCCAAGAGGGAGAGTCATTCTTCAAGTTCAGCCACAAACTCATGGCAAACAGGTGGAAACAACTGAGACTAGTGGTGGAGCATAGTGAGTTGTTCAGTTTGCCTAAATTTTCACCAGCATTCTGCACTTTTTTCAAACAGGTCTTGGAGCCTCAACCAGCTTTTGTGTGGTTAAAGTGTGAGGGAAACGTGGAAGACTGCGAAAGCTTCCTTCGAGCACACAACATCTTAACTAGAAGTGGAAAACACTTTGGGGTCAGTCCAAAATACGTAAGAATTAGCATGTTGGATACTGATGAAAATTTTAGCCACTTTCTAGAGAGACTTTCTGCCATAAAGTCGTGA 495 0.4283 MGRWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSWEQGNSQEGESFFKFSHKLMANRWKQLRLVVEHSELFSLPKFSPAFCTFFKQVLEPQPAFVWLKCEGNVEDCESFLRAHNILTRSGKHFGVSPKYVRISMLDTDENFSHFLERLSAIKS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01295 164 Gene3D Aspartate Aminotransferase, domain 1 48 164 IPR015422 GO:0003824
Vimu10g01295 164 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 4 161 - -
Vimu10g01295 164 Pfam Allinase 4 162 IPR006948 GO:0016846
Vimu10g01295 164 Gene3D - 2 47 IPR015421 GO:0003824
Vimu10g01295 164 SUPERFAMILY PLP-dependent transferases 4 161 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01295 Vimu-Chr10 13302697 13303298 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01295 K16903 - gmx:100820582 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01295 10 13302697 13303298 Vimu10g01295 10 13302697 13303298 ECH
Vimu7g03661 7 31719948 31724377 Vimu10g01295 10 13302697 13303298 PCT