Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03327 ATGGGGCAGTTCTCCCAGGACGATTATGTAGCTGTCAGTGAATCAACTTCCACCAGGGCAAATCACTCAAGTAAAGTTTCACTTCTTCCTCTTGTATTTCTCATATTCTATGAGGTTTCAGGGGGGCCTTTTGGGGTTGAGGATACTGTGCAGGCAGCTGGTCCTCTGTTAGCCCTCCTTGGATTCTTGCTTTTCCCATTAATATGGAGTGTTCCTGAAGCTTTGATCACGGCGGAGATGGGTACCATGTTCCCTGAAAACGGTGGTTATGTGGTTTGGGTTTCCTCTGCTCTGGGTCCCTATTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTGAGTGGGGTGATAGACAATGCTTTATACCCAGTTCTATTTCTTGACTATCTGAAGTCAGCAGTCCCAGCTGTAGGTGGTGGATTGCCTAGAGTTGCTGCAACATGGGCTCTGACTATTGTGCTCACTTACTTGAACTATAGGGGTATGGTCATTGTGGGATGGGTTGCTGTTTGTTTAGGGGTTTTCTCACTCCTCCCTTTTGTGGTTATGGGATTCTTGTCAATTCCCGATCTACAGCCTTCAAGATGGGCTGTGACAAACCTCAACGATATTGATTGGAATTTGTATCTGAACACTCTATTTTGGAATCTTAACTACTGGGATTCCATAAGTACTCTTGCTGGAGAAGTGGAAAATCCAAAGAAAACTCTTCCAAGGGCTTTGTTTTACGCTGTAATTCTAGTAGTTCTAGGGTACTTCTTTCCTCTCCTAATAGGTACTGGTGCTGTTCCCCTCAACCGTGATCTTTGGTCGGATGGCTACTTCTCAGATGTTGCTATGATCATAGGAGGGGCATGGTTGAGATGGTGGCTTCAGGCTGCAGCCGCCATGTCAAATATGGGAATGTTTGTTGCTGAAATGAGCAGTGATTCTTTCCAGCTACTAGGGATGGCTGAGAGAGGAATGTTGCCTGAGTTCTTCACCAAGAGGTCTCGCCACGGAACACCTCTAATAGGAATACTCTTTTCAGCATCAGGTGTGATTATACTGTCATGGATGAGCTTTCAAGAAATTGTAGCTGCTGAAAATTTCTTGTACTGTTTTGGGATGATTCTGGAGTTTATTGCATTCATTCTGTTAAGGATCAAACACCCCAATGCATCTCGCCCTTACAAGATAGCAGGGGGAACAGCAGGAGCAATTTTGCTTTGTATCCCTCCCACTATACTGATTGGTGTTGTGTTGTATTTCTCCTCCCTTAAAATAATGTTTGTAAGCCTCATCGCTATTGCAATAGGCCTTGTGTTGCAGCCTTGCCTCAAATATGTGGAGAAAAAGAGATGGATGAAGTTTTCCCACAGTTCTGAGCTCCCTGATATTGGCAATCTGGATGAGAATCGCTCTTTGGTGTATTGA 1413 0.4473 MGQFSQDDYVAVSESTSTRANHSSKVSLLPLVFLIFYEVSGGPFGVEDTVQAAGPLLALLGFLLFPLIWSVPEALITAEMGTMFPENGGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAVPAVGGGLPRVAATWALTIVLTYLNYRGMVIVGWVAVCLGVFSLLPFVVMGFLSIPDLQPSRWAVTNLNDIDWNLYLNTLFWNLNYWDSISTLAGEVENPKKTLPRALFYAVILVVLGYFFPLLIGTGAVPLNRDLWSDGYFSDVAMIIGGAWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFTKRSRHGTPLIGILFSASGVIILSWMSFQEIVAAENFLYCFGMILEFIAFILLRIKHPNASRPYKIAGGTAGAILLCIPPTILIGVVLYFSSLKIMFVSLIAIAIGLVLQPCLKYVEKKRWMKFSHSSELPDIGNLDENRSLVY 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03327 470 Gene3D Amino acid/polyamine transporter I 24 456 - -
Vimu7g03327 470 PANTHER POLYAMINE TRANSPORTER PUT1 14 459 IPR044566 GO:0022857
Vimu7g03327 470 Pfam Amino acid permease 31 416 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vimu7g03327 470 PIRSF AA_transporter 3 466 - -
Vimu7g03327 470 FunFam Amino acid permease, putative 22 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03327 Vimu-Chr7 28211290 28214869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03327 12 459 Organic Solute Cotransporters AT1G31830 75.223 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03327 - - gmx:100813355 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03327 7 28211290 28214869 Vimu7g03327 7 28211290 28214869 ECH
Vimu7g03327 7 28211290 28214869 Vimu11g00970 11 10060303 10061679 PCT