Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03292 ATGGCCTTCAACAACAGATCCAAGAAGTCCAGTTCCCCTTCTAATTTTACTTTCTGTGTCACACTTTTCTTCCTTGTCCTCTTCACCATACCAACATTTTTCCTCCTCCACACACCCACCACATGCACCACCCTTTCCAAAACCTGGTCAGGTGATCTTCTTTTAGCCGAATTCACATGGAACAAACTCCCATTTCTAGAACAGAACCCTTCACCTGTATCTCTCAAAATCGCTGTCTTCTCTAGAAAATGGCCTATTGGAACCACTCCTGGTGGCATGGAGCGCCATGCATACACACTTCACACTGCTCTAGCTCAGCGGGGCCACAAGGTTCATATATTCACCTCTCCTCCACAAGAAGAAACCACTTCGACCTTTTGTTCAGACGCAACCAATCACCACCATTGCCATGAAGGGGAGCCAGGCAAGTGGCGCTACAACAAAGCATGGGAACAGTTTCTGGAACAAAACCAGAAAGAACCCTTCGATGTTGTTCACTCAGAAAGTGTAGCACTTCCTCATTGGCTGGCTCGCGACCTTCCAAACCTTGCAGTTTCGTGGCATGGCATAGCACTCGAGAGTTTGCAATCTAGCCTTTTCCAAGACTTAGCTCGTAGAACTGATGAACCTAGATCCCCGGATTTTGACAAAGGCTTATACGGGGTTCTCCCTAAGATTCTAAATGAGATAAGGTTCTTCAGAAACTATGCACACCATGTTGCTATCAGTGATAGTTGTGGTGAAATGTTAAGAGATGTGTACCAAATCCCCAGCAGAAGAGTGCATGTGATTCTTAATGGAGTTGATGAGGGTGACTTCAGAGAAGATGTGGAATTGGGAAAGGAATTTAGAACCAAAATTGGCATTCCAAGCAATGCTAGTTTAGTGCTTGGTGTCGCTGGAAGATTAGTTAGGGACAAAGGCCACCCTCTCCTTCATGAAGCATACTCTAGGCTAATAACAAAACATCCTAATGTGTATTTGATTGTAGCTGGCTCAGGACCATGGGAGAACCGATATAGGGATTTAGGAAATCAAGTTCTTGTTCTTGGATCCATGAGTCTTTCCATGCTACGAGCATTCTACAATGCCATTGACATTTTTGTCAATCCTACACTTAGACCACAAGGCCTTGATCTTACTCTGATGGAAGCCATGATGAGTGGGAAACCCCTTTTGGCATCAAGATTTCCAAGCATCAAAGGTAGTGTTGTGGTGGATGATGAATTTGGCTTTATGTTCTCTCCCAACGTGGAATCCCTCATGGAGGCACTTGAAGCTGTGGTGAAGGAAGGAAAGGTAAGGCTTGCAAGGAGGGGAAAGGCATGCCGTGAATATGCAATTTCTATGTTTACAGCAACAAAGATGGCGTTGGCCTATGAGAGACTATTCCTGTGCATAAAAGAAGATAAATTTTGTAACTATCATTGA 1431 0.4444 MAFNNRSKKSSSPSNFTFCVTLFFLVLFTIPTFFLLHTPTTCTTLSKTWSGDLLLAEFTWNKLPFLEQNPSPVSLKIAVFSRKWPIGTTPGGMERHAYTLHTALAQRGHKVHIFTSPPQEETTSTFCSDATNHHHCHEGEPGKWRYNKAWEQFLEQNQKEPFDVVHSESVALPHWLARDLPNLAVSWHGIALESLQSSLFQDLARRTDEPRSPDFDKGLYGVLPKILNEIRFFRNYAHHVAISDSCGEMLRDVYQIPSRRVHVILNGVDEGDFREDVELGKEFRTKIGIPSNASLVLGVAGRLVRDKGHPLLHEAYSRLITKHPNVYLIVAGSGPWENRYRDLGNQVLVLGSMSLSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGSVVVDDEFGFMFSPNVESLMEALEAVVKEGKVRLARRGKACREYAISMFTATKMALAYERLFLCIKEDKFCNYH 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03292 476 Pfam Glycosyl transferases group 1 295 439 IPR001296 GO:0016757
Vimu7g03292 476 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 76 464 - -
Vimu7g03292 476 CDD GT4_PimA-like 76 464 - -
Vimu7g03292 476 Pfam Glycosyltransferase Family 4 91 270 IPR028098 -
Vimu7g03292 476 PANTHER GLYCOSYLTRANSFERASE 17 476 - -
Vimu7g03292 476 Gene3D Glycogen Phosphorylase B; 75 277 - -
Vimu7g03292 476 Gene3D Glycogen Phosphorylase B; 278 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03292 Vimu-Chr7 27947525 27948988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03292 1 475 Glycosyltransferase AT4G19460 62.626 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03292 - - gmx:100817087 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03292 7 27947525 27948988 Vimu7g03292 7 27947525 27948988 ECH
Vimu7g03292 7 27947525 27948988 Vimu11g00977 11 10138999 10140450 PCT