Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03278 ATGACATACAATGGCCTTGAGAGTTGCATGTTGAATAACCAGTCCTACGAAGATGAGAGCAGAACAAGTAGAGGAGATGAATGCATAACTGATTCATTTGACGATGATTCCAGTTGTTCCTCCAGCAAGGATGCTTTTGGATCATTCTCTTCAAACTGTTTAACGATGAAAAGGGACGATAAAGGATTGGAGGAATGGGAGCTCTCAGAAAGTCCTCAAGATTTTTATGCCAAAGAGAAGACTTTTGGTATGGACCATTCAGATATAGAAGCCATGAAGGAAAAATTTTCGAAGCTTTTGCTTGGTGAAGATGTTACAGGAGGAACCAAGGGTCTCAGTACAGCTTTGGCGCTATCTAATGCCATCACAAACCTATCAGTGACGGTTTTTGGAGAGCTGTGGAAATTGGAACCACTATCTGAAGAAAGGAAGAGAAAATGGCAGAGAGAGATAGACTGGTCATTGTCTCCTACCAACTATATGGTTGAGCTTGTTCCCTCTACGCAAAGCGGTGCCGATGGTGGGATGTTTGAGATAATGACCTCAAAGCCTCGTGCAGACATCCTCATGAATCTTCCGGCACTTCAGAAGTTGGATTCTATGCTGATTGAGACACTAGATTCGATGACGAATATGGAGTTTTGGTATGCAGAGGGAGGAAACAAGGCAGAAGGGAGGGACACAAATGCACAGCATAGCAAAAAATGGGGGCTTCCATCACCCAAAGTTCCAAAATGTGGTCTTTCCGACAGTGAAAAAAAGAAGCTGCTTCATCAGAGTGGGGTGGTGCGTCAAGTATTCAAGGCTGCCAAATCCATCAATGAAAGTGTTTTGTATGAAATGCCTGTGCCAGCGATTATTAAAGACGCACTTGCAAAGTCTGGAAAGGCAAACCTTGGACACGAACTGAACAAGGTTTTGGCTGCTGAATCAAGCTCTGCAGAAGACATGCTTAAATCGCTGAACTTGAAATCCGAACATGCTGTCCTAGAGACTGTTAATAAACTGGAAGCTGCTATATTGTCATGGAAAGAGAGAATTGCAGAACATGCTGGTGGCAAACACCAAGCTCGTTCGACGTGGTCATCTTTTGTGAAGGATCCTGCGTTAGAGGTTGATAAACAGAAGTTATTATTGGACCGAGCTGAAACACTACTGCAGCTGATTAAAATCAGACACCCAAACCTTCCTCAAACATTTGTCGATGCAGCCAAAGTTCAATATGGCAAGGATATTGGACATTCCATTTTGGAAGCATATTCCAGAGTTCTAGCAAATTTAGCCTTCTGCATTCTGTCTAGAATAGGAGAAGTATTACAGGAGGATTCCTTAAGCAATCCGAATTCACCTATGGTGGCAGAAAACTCTCCTGGGATGAATCTTTCTCAAACTAGGGTGGTGGATTCACATATCAAGCAATCCTTACTTGATAAGATGAACAAAACGGATGGGCAATATTGTGATTCTAGCTCTTACAGTACTTGTGATTTAGGACATTCTTCTTTCCATACAAAATCCAGATCTATGACAGCCACGCCAAACCAGAGTGGTGGCTGGAGCATTAGTAGAGAAGTTTGTTCAAGTCTGTCTCATAGAAATTCTCCATAG 1608 0.426 MTYNGLESCMLNNQSYEDESRTSRGDECITDSFDDDSSCSSSKDAFGSFSSNCLTMKRDDKGLEEWELSESPQDFYAKEKTFGMDHSDIEAMKEKFSKLLLGEDVTGGTKGLSTALALSNAITNLSVTVFGELWKLEPLSEERKRKWQREIDWSLSPTNYMVELVPSTQSGADGGMFEIMTSKPRADILMNLPALQKLDSMLIETLDSMTNMEFWYAEGGNKAEGRDTNAQHSKKWGLPSPKVPKCGLSDSEKKKLLHQSGVVRQVFKAAKSINESVLYEMPVPAIIKDALAKSGKANLGHELNKVLAAESSSAEDMLKSLNLKSEHAVLETVNKLEAAILSWKERIAEHAGGKHQARSTWSSFVKDPALEVDKQKLLLDRAETLLQLIKIRHPNLPQTFVDAAKVQYGKDIGHSILEAYSRVLANLAFCILSRIGEVLQEDSLSNPNSPMVAENSPGMNLSQTRVVDSHIKQSLLDKMNKTDGQYCDSSSYSTCDLGHSSFHTKSRSMTATPNQSGGWSISREVCSSLSHRNSP 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03278 535 FunFam Rop guanine nucleotide exchange factor 14 314 451 - -
Vimu7g03278 535 Gene3D PRONE domain, subdomain 1 82 317 - -
Vimu7g03278 535 Gene3D PRONE domain, subdomain 1 318 452 - -
Vimu7g03278 535 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 15 490 IPR038937 GO:0005085
Vimu7g03278 535 FunFam Rop guanine nucleotide exchange factor 14 81 312 - -
Vimu7g03278 535 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 87 446 IPR005512 GO:0005085
Vimu7g03278 535 ProSiteProfiles PRONE domain profile. 79 452 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03278 Vimu-Chr7 27834676 27841480 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03278 - - gmx:100818685 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03278 7 27834676 27841480 Vimu11g00984 11 10245579 10252048 PCT