Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03273 ATGGAGGAGAGAACCATAGGAAGAAATGGAAGCTCTAGAAAGGGTAGTTTTAGGTTTGGAGTAGGAGTGGATGGTAAGAAGGATCACACTGTGGTGGAGCTTGGAAGTATTGACACACACAAACTTCTTCTCAGCGGTGGAGAGAAAGAGAAAAAACAACAACCTCTCATCAACTCTCTCTCTTCCAGGCAAATGAAATCCCTATCTGCTCTCTGTGACAGTATCTTACCTTCCGTCGACCACTCCGTTCACACTTCCGATGAATCTCTCAACAAGTTCTATCGGATTTCAGCTTCCATGGCAGGCACACCAGAACTTTTAGGGGGAGTGATATCTGAGAAGCTGAAACACCCATTGACAGGGTTACTGAAGTTGTCGTTATGGGGGTTGTCAACGTGGTTTGGAACATTAATTTTGTGTGGGATGGGGTGTGTCTCAACAAAATTTCCCTTCATCCATAGCTATCCTGAGTTGTCTCTGCAGAAAAGACAAGAGATCATGCGATCATGGTCTCTCAGTTACATTCGTCTCTTGAGACTGCTCTTCAGGACCATCAAACTTCTCACTCTCCTTGTCTTCTTTACTCAGACAGATGAATCAGAAGAGAACTTTTCATGGAAAGCAATTGGATACTGTGGACCTGATCCAAAATTCAAAGCTCAGTTGAAGAACCACTTTTTAGATGGAAAATCTAAGGGAGCTGAAGATGATAAGGAAGATGAAGATGCAGAAGAGGTGATAGGACCCCTCTACAAAGGTCTTGTCCATCTGAATAACCCACGAGACATCGCTGCAGATGCTCTGAGACGGTTAGGATTCTCTGTCTCTGTCAATCGTAGAAAGCACAAAGCTGCAGCAAACTTGTCTTCTCCTTCTTTGGTGATTCAATGTGATGCTGTGGTCGTTGGTTCTGGCTCAGGGGGTGGAGTCATAGCTGGTGTTCTGGCAAAAGCTGGTTACAAAGTGTTGGTGTTGGAAAAAGGAGGCTATTCTGCAAGGAACAATCTTTCCCTTCTTGAAGGACAATCCATGGATCAAATGTACCTCAATGGTGGATTGGTTGCAAGTGATGACATGGGTATGTTCATACTATCGGGATCCACTGTTGGTGGAGGGTCGGCGATAAACTGGTCTGCTAGCATTAAAACCCCACAGCATGTGTGCAAGGAATGGTGTGAGAAACATGGGCTTGAGCTGTTTGAGAGTGAATTGTATAGAGAAGCCTTGGATGCTGTCTGTGAGAAGATGGGAGTTCAATCTGAGATTGAAGATGAAGGATTCAACAATGCTGTTCTGAGAAAAGGGTGTCAAGAGATGGGGTATCCTGTGAATACAATTCCTAGGAATTCTTCATCAGATCATTACTGTGGCTGGTGCTGCATGGGTTGTAAGGATGGGAAGAAGAAGGGCACCTCAGAAACATGGTTGGTGGACTTGGTGAAATCTGGAAATGGAGCAATTCTTCCAGGTTGTGAGGCACTGAAAGTCTTGCACAAGAAAATGGAAGGGAGGGATAGAAAGGTTGCAGGTGGAGTGGCCTTTGAATTTGAATATAAAGGGACTAAGGACATTTGTGTGGTGGAGTCCAAGGTCACCATTGTAGCATGTGGAGCTCTATGTACTCCAGCATTGCTTAAAAGAAGTGGCTTAAGGAATCAGAACATTGGGAGGAACTTACATCTTCATCCGGTGACAATGGCTTGGGGCTACTTCCCAGATGAATCTGCTTCTGAGGTGTGGCCGGAGGCACATAAGAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCCTCTGTTGTTGGAGAGTTTGAACAATCTGGATATGGTGCAGTGATCCAAACACCTTCATTGCATCCTGGCATGTTCTCAATTGTCACACCGTGGACTTCTGGAGTCGATATAAGAGATCGAATGCGAAAATTTTCTAGAACAGCTCATATATTTGCACTGGCAAGGGATAAAGGATCAGGTACTGTGGAATCACCACATCGTATCAGTTATAGATTGGCAGGTGTGGATGAAAAGAACTTGCAGAAAGGAATTGAAAAGGTGCTGAGAATTCTGGCGGCTGCTGGAGCTGAAGAAATTGGAACACATCATAATAAGGGAAGGACCTTAAATGTAAAGCAAGTGAGCTATCATGAGTTTGAGAAGTTCGTTAAGGAAGAAAGTTCAAGGCCACTGGCAGACCTTTCAACACCATTGTGTTCAGCACATCAAATGGGGAGTTGCAGGATGGGTTCTAATCCAAAGCAATCAGTGGTGAATCAGACAGGAGAAACATGGGAAATGGAAGGCCTTTATGTGGCTGATACAAGTGTCTTTCCCACAGCTTTGGGAGTGAATCCAATGGTCACTGTTCAAGCTATTGCTTACTGCGTAGCACAATCTGTCCTAGAAGTTCTCAGAAGGAAAAGAAGTAAAATCAACCAACCCACCATGGTGGAAAGTCCTCCTAAATTCAAATTCACATTCATCTTCTTCATCATCTTCTCCCTCTCTCTTGGCTTAGTTTCCTTCTCCTTGTGCATAGCCTCTGAGATTAAGAGGAACAAGAAGGAGGATCTCAGATGGAATGGGAGACTGTGTCATTTACCGTCAAGTCCAGCATTTGGATTGGGAATTGCATCATTGGTTTGTTTGGCTTTGGTGCAGAGCATTGGGAATTCTATATTGTTCAAGAATTGCTGTTCAGGAGGGAAAAGAAACGCACGGTTTAAGATACCCATCGTTGCAAGGATTCTGCTTTTGATCTCTTGGGTTGGGTTTGGAATTGCAGTTATTTTATTAATTGCTGCGACAAGCATGAGCAAAAGGCAAGCATATGGGGAAGGGTGGTTGAAAGGTGAATGCTACCTTGTGAAAAAAGGGACATACGCTGGTTTAGCCATATTGATTTTAGTTACAGTAGGATCATTAATTGGTTCAGGTTTGTTAACAATGAAGACCAATAAGGCAGATCAGGGTCACAAAATACACGCACAAACGGGTGAAACTAGGGATTAA 3006 0.4388 MEERTIGRNGSSRKGSFRFGVGVDGKKDHTVVELGSIDTHKLLLSGGEKEKKQQPLINSLSSRQMKSLSALCDSILPSVDHSVHTSDESLNKFYRISASMAGTPELLGGVISEKLKHPLTGLLKLSLWGLSTWFGTLILCGMGCVSTKFPFIHSYPELSLQKRQEIMRSWSLSYIRLLRLLFRTIKLLTLLVFFTQTDESEENFSWKAIGYCGPDPKFKAQLKNHFLDGKSKGAEDDKEDEDAEEVIGPLYKGLVHLNNPRDIAADALRRLGFSVSVNRRKHKAAANLSSPSLVIQCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGGYSARNNLSLLEGQSMDQMYLNGGLVASDDMGMFILSGSTVGGGSAINWSASIKTPQHVCKEWCEKHGLELFESELYREALDAVCEKMGVQSEIEDEGFNNAVLRKGCQEMGYPVNTIPRNSSSDHYCGWCCMGCKDGKKKGTSETWLVDLVKSGNGAILPGCEALKVLHKKMEGRDRKVAGGVAFEFEYKGTKDICVVESKVTIVACGALCTPALLKRSGLRNQNIGRNLHLHPVTMAWGYFPDESASEVWPEAHKKSYEGGIMTAMSSVVGEFEQSGYGAVIQTPSLHPGMFSIVTPWTSGVDIRDRMRKFSRTAHIFALARDKGSGTVESPHRISYRLAGVDEKNLQKGIEKVLRILAAAGAEEIGTHHNKGRTLNVKQVSYHEFEKFVKEESSRPLADLSTPLCSAHQMGSCRMGSNPKQSVVNQTGETWEMEGLYVADTSVFPTALGVNPMVTVQAIAYCVAQSVLEVLRRKRSKINQPTMVESPPKFKFTFIFFIIFSLSLGLVSFSLCIASEIKRNKKEDLRWNGRLCHLPSSPAFGLGIASLVCLALVQSIGNSILFKNCCSGGKRNARFKIPIVARILLLISWVGFGIAVILLIAATSMSKRQAYGEGWLKGECYLVKKGTYAGLAILILVTVGSLIGSGLLTMKTNKADQGHKIHAQTGETRD 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03273 1001 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 57 807 - -
Vimu7g03273 1001 SUPERFAMILY FAD/NAD(P)-binding domain 295 800 IPR036188 -
Vimu7g03273 1001 Pfam Protein of unknown function (DUF1218) 878 970 IPR009606 -
Vimu7g03273 1001 Gene3D - 282 609 IPR036188 -
Vimu7g03273 1001 Pfam GMC oxidoreductase 298 564 IPR000172 GO:0016614|GO:0050660
Vimu7g03273 1001 Gene3D - 720 806 IPR036188 -
Vimu7g03273 1001 Pfam GMC oxidoreductase 664 793 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03273 Vimu-Chr7 27742392 27753211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03273 27 802 Acyl Lipid Metabolism Gene Families AT4G19380 57.362 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03273 K17756 - gmx:100775376 1380.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03273 7 27742392 27753211 Vimu7g03273 7 27742392 27753211 ECH
Vimu7g03273 7 27742392 27753211 Vimu11g00991 11 10330776 10338417 PCT