Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00991 ATGAACAGAAAAAGCATGGAAAACGACGGGGAAAGCCATAGCAGAAGTGGTAGTTTTAGGATGGGGTTTGGCTTGGGCGTCAACGAGGCAAAAGTTCACACCGTGCTTGAGCTTGGTACTGTTCATACACACACTAGTCTTCTCCTAGATGCTGATGATGATGGTGATGGTGATCGAGATGTTGGTGAGGAGAGAGAGAAACACCCAAAACCTCTCAAAAACTCTCTCTCTCCTAGGCAGATGAAGTCCCTAGTTGCTCTCTGCGACACCATCATACCTTCCATCGACAACAACCTCGTTCGCTCCTCCGATGAATCTGTTGCCAACTTCTACAACACTTCAGCTTCCATGGCTGGAACACCTCACCATCTAGAGAAAGTGATAAGTGAGAAACTGAAGCACCCGAGTACATGGCTCCTGCTACTGACATTATGGCTACTGTCTACGTGGTTTGGCACGTTCATACTGTGTGGCATGGCGAGTGTGTCATCAAGGTTTCCCTTCTTCCATAGCTACCCTGAAATGTCTCTGCTCAAACGCCAAAGGGCTATGCAGTCTTGGTCTCTCAGCTACCTTCGTCCCCTTAAGATGTTTTTCAGGACTATCAAGCTTCTCACTCTCCTTGTCTTCTTCACTCAGGTAGATGAAGCAGAAGAAAACCCAGCATGGAAGGCAATTGGATATTGTGGACCTGATCCAGAGCTTAAAGCACAGTTGAAGAACCACTTCTTACGTAGAACATTGAAGGAAGAAGAACATGAAAAAAAGGACAAGGACGACGATGATGATGATGAAGAAGAAGAGTTCAGAGGCCCTCTTCACAAAGGCCTTGTCCATTTAAACTTTCCAATAGACATCATTAAAAATTCTCTAAGACGATTTGGATTCTCAGTCTCTACCACATCTAAAAGGAATAAGGCTTCTAACATGTCATCACCTTCTTTAGTTATCCAATGTGATGCAGTGGTTGTCGGTTCTGGATCTGGTGGTGGGGTAGTAGCTGGAGTTCTAGCAAATGCTGGTTATAAAGTACTGGTTTTGGAGAAAGGAAGCTATTGTGCTAGGAACAATCTTTCCCTTCTTGAAGGACCAAGCATGGATCAAATGTACCTCTCCAATGGTTTGGTTGCAACAAAGGATATGTCTGTCCTAATACTAGCAGGATCCACAGTTGGTGGTGGATCTGCAGTGAACTGGTCAGCCAGCATTAGAACTCCTGAACATGTATGCAAGGAGTGGTGTGATCGCCATGAGCTAGAATTGTTTGAAAGTAAGTATTACAAAGAAGCCATGGATGCTGTGTGTGACAAAATGGGAGTCCAATCTGAGATTCAAGAGGAAGGGTTCAACAACGAAGTTCTAAGAAGAGGGTGTCTAGAAATGGGATATCATGTGTGCAATATTCCAAGGAATGCTTCATCGGATCACTACTGTGGTTGGTGCTGCATGGGGTGTAAGAATGGAAAGAAGAAAGGTACATTAGAAACATGGCTGGTGGATCTGGTGAAATCAGGTAACGGAGCAATCATTCCAAATTGTGAGGCCATACAAGTCTTGCACAAGAGAAAGAAAGGAAGTGAGAGAAAAACAGCTCGTGGAGTGGCTTTTGCAATTGAATACAAGGGAAAAAAGGACATTTGTGTAGTGGAGTCCAAGGTTACAATTGTAGCCTGTGGAGCACTCAGTACTCCAGCATTACTTAAGAAAAGTGGATTGAAGAATGAAAACATAGGAAAAAACTTGCACCTTCATCCAGTGGCAATGGCTTGGGGTCACTTCCCTGATTCATCTTCACCTGAGGTGTGGCCAGAGAAACATAAGAAGAGCTATGAAGGAGGGATTATGACAGCAATGTCCACAGTTGTTGCGCAGTTTGACAAAACTGGATATGGTGCAGTGATCCAAACGCCTTCATTGCATCCTGGTATGTTCTCCATTCTAATGCCTTGGACTTCTGGCAAAGATATGAAAGATCGAATGCTAAAGTTTTCAAGAACAGCTCATGTATTTGCCCTGGCAAGGGATCAAGGATCAGGAACGGTGAACTCACCTTCTCTTATAAACTATCAGTTGAAAGATGTGGACAAGGAAAATTTAGCTACAGGAATTGAGAAGGTACTGAGAATTCTTGCAGCAGCTGGAGCTGAAGAAATTGGGACCCACAATAACAAGGGAAGGAGCATAAATGTTAAGAAGGTGAGCTATCATGAGTTTGAGAAATTTGTGAAAGAAGAAAGTTCAGTGTCTTTAACAGACCTTACAACACCATTGTGTTCAGCACATCAGATGGGAAGTTGTAAGATGGGAACTAATCCAAGTAACTCAGTTGTGAACCAAATGGGAGAGACATGGGAAGTGGAGGGCCTTTATTTGGCAGACACTAGTGTCTTTCCCACAGCTTTAGGTGTCAATCCAATGGTCACTGTTCAAGCTATTGCTTATTGCACAGCTCAGTCTGTTGTTGAAGTTCTTAGAAGGAAGAGAAACTGA 2490 0.4365 MNRKSMENDGESHSRSGSFRMGFGLGVNEAKVHTVLELGTVHTHTSLLLDADDDGDGDRDVGEEREKHPKPLKNSLSPRQMKSLVALCDTIIPSIDNNLVRSSDESVANFYNTSASMAGTPHHLEKVISEKLKHPSTWLLLLTLWLLSTWFGTFILCGMASVSSRFPFFHSYPEMSLLKRQRAMQSWSLSYLRPLKMFFRTIKLLTLLVFFTQVDEAEENPAWKAIGYCGPDPELKAQLKNHFLRRTLKEEEHEKKDKDDDDDDEEEEFRGPLHKGLVHLNFPIDIIKNSLRRFGFSVSTTSKRNKASNMSSPSLVIQCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYCARNNLSLLEGPSMDQMYLSNGLVATKDMSVLILAGSTVGGGSAVNWSASIRTPEHVCKEWCDRHELELFESKYYKEAMDAVCDKMGVQSEIQEEGFNNEVLRRGCLEMGYHVCNIPRNASSDHYCGWCCMGCKNGKKKGTLETWLVDLVKSGNGAIIPNCEAIQVLHKRKKGSERKTARGVAFAIEYKGKKDICVVESKVTIVACGALSTPALLKKSGLKNENIGKNLHLHPVAMAWGHFPDSSSPEVWPEKHKKSYEGGIMTAMSTVVAQFDKTGYGAVIQTPSLHPGMFSILMPWTSGKDMKDRMLKFSRTAHVFALARDQGSGTVNSPSLINYQLKDVDKENLATGIEKVLRILAAAGAEEIGTHNNKGRSINVKKVSYHEFEKFVKEESSVSLTDLTTPLCSAHQMGSCKMGTNPSNSVVNQMGETWEVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSVVEVLRRKRN 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00991 829 Coils Coil 248 268 - -
Vimu11g00991 829 PIRSF Lg_Ch_AO 63 829 IPR012400 GO:0046577
Vimu11g00991 829 MobiDBLite consensus disorder prediction 1 20 - -
Vimu11g00991 829 MobiDBLite consensus disorder prediction 48 76 - -
Vimu11g00991 829 SUPERFAMILY FAD/NAD(P)-binding domain 317 821 IPR036188 -
Vimu11g00991 829 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 73 828 - -
Vimu11g00991 829 Gene3D - 750 827 IPR036188 -
Vimu11g00991 829 Pfam GMC oxidoreductase 320 586 IPR000172 GO:0016614|GO:0050660
Vimu11g00991 829 Gene3D - 302 634 IPR036188 -
Vimu11g00991 829 Pfam GMC oxidoreductase 687 815 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00991 Vimu-Chr11 10330776 10338417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00991 41 824 Acyl Lipid Metabolism Gene Families AT4G19380 56.798 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00991 K17756 - gmx:100778575 1344.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00991 11 10330776 10338417 Vimu11g00991 11 10330776 10338417 ECH
Vimu7g03273 7 27742392 27753211 Vimu11g00991 11 10330776 10338417 PCT