Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03206 ATGAAAACCGTACTCATCAGAAACCAACTGTCCAACACAAGGAGATTAAAAATGATGGAAGTTGTGATTGTTGCACTTGCGGCCACACTTGGGAATTTTCTGATGGGATGGGATAGTTCAACTATTGCAGCTGGTACGACCTACATCAAGAAGGAGTTCGTAGTGGAAGCGACAATTGAAGGGATAATTGTGTCCATGTCGTTTATAACCGGTACTGTTGTGACAATATTCTCCGGGGCAGTGTCTGATATGGTTGGAAGACGTCCTATGCTCATAACATCTTCTGTGATGTATTTCCTGAGTGGTCTGGTAATGTTTTTTGCTCCTAATGTTGCTGTTATTCTGGTAGCGAGGATAGTGAATGGGGTTGCCATTGGTCTGGCTTATACTCTTAATCCTCTCTACATATCTGAGGTAGCACCGGCCGATATCAGAGGCCAATTGAACACTTATACTCAGTTTGCTTGTTCTGGTGGAATGTTTTTGGCTTACGTTATGGTGTTCTTAATGTCCTTGACTGACTCACCAAGTTGGAGACTCATGCTTGGAGTTATTTCAATTCCTGCTGTTTCCTACTTTTTACTGACTGTCTTTTACCTGCCCGAGTCTCCAAGATGGCTTGTGAGTAAAGGTCGGATACTTGAGGCTGAAAGAGTTCTGAAAAGGCTTCGTGGCACTGATGATGTTTCAGGGGAATTGGCGTTGCTGGCTGAGGGTCTCAGCCCTGGGGGTGAAGCCACTTCCATAGAAGAGTATGTAGTTGCCCCAGCTGGCGAGATTCTTGTTAACCAGGAAGCAGGGAAAGATTATATAAAGTTATATGGTCCCAATGAGGGGGTTACAATGGTTGCTCATACGGTGAATGGACAGGGTAGCTCGATATCCCGTAGTATGTTGTCTCAGCAAGGAAGCTTTGGGGGTCTGTCTAGTACTGGTCTTAAGGATCCTATTGTCAATCTCTTCGGAAGTTTGCATGAGAGTACTCTCCCTGAGAGTGGAGGTTCACGCAGCATGCTAATTCATAATGCAAACAGTATCTTTAGCATGGGAGAGCCAGATTCTCCCTTTGGTACCGGTGACAACCTGCATGCGCCACTAATGTCATTTCAAGGGGGTGCTGGTGAAAGGGCTCATGGATCAAAGGACATGTTGGGTATGAGGAGCACTAGCAGCTTGAGAAGTAATAGTAGTTTAGCTCATGGGAATGCGGTTGAAACTCCTAAAAATACAAACATTGGTGGAGGTTGGCAGTTGGTTTATAAATCAGCTGATGGTGTTGGAGGTGGGAAAAGAGAAGGGCTCCAAAGGGTTTATTTGCATGCGGAACCTACTGCAGTGTCTAACTCGCAGCATGTTTCATCATTTGTTTCAACTTCTGGCTATGACATACCAATAGATGGCGGTGAAGCGTATCAAGCTGCTGCTCTTGTTAGTCAGTCAGTTCTAGGAACTCATGATTTGTTGCATCTGCCAGAAGTTGCGGCAAAAGGCTCAAAATGGAGAGCTCTGCTAGAACCAGGAGTCAAGCGTGCATTAGTTGTTGGCATTGGACTTCAAATTCTTCAACAGGCTGCTGGCATAAATGGGTTTCTGTACTATGCTCCCCAGATTCTTGAACAGGCAGAAATAGGAGCTCTTTTATCAAATTTGGGCCTTAGTTCTGCATCTGCTTCTTTTCTTGTAACTATCATTACAACATTCTGTATGCTTCCTTGTATAGCTATTGCAATAAGACTCATGGATATTTCTGGCAGGAGGTCTATCATGCTGTACACAATACCCATTTTGATAGTTTGCCTCCTGGCACTAATAATCAAGCAGTTCTTTGAACTAAATTCTGTGATCAATGCTGCAATCACTTGTATCAGTGTTGTGGCTTATGAAAGCGTCTTCTGCATGGGCTTTGGCGTTATTCCAAACATCATATGTGCGGAAATCTTCCCAACAAGTGTTCGTGGAATCTGCATTTCCCTGACTTCTCTTACATATTGGAGTTGTACCTTGATTGTGACCTTAGTATTCCCCACCTTGCTCCAGCTTCTCGGTCTCCCTGGTGTCTTTGGGTTATTTGTCCTTGGCTGCATCATTTCATGGACATTTGTCTACCTGAAAGTTCCTGAAACAAAAGGCATGCCTTTAGAAGTTATTATTGAATTTTTTGCTCTTGGTGCAAAACCTGGTACTGATCCTGCAGCAATTGGAATCAAATAG 2211 0.4392 MKTVLIRNQLSNTRRLKMMEVVIVALAATLGNFLMGWDSSTIAAGTTYIKKEFVVEATIEGIIVSMSFITGTVVTIFSGAVSDMVGRRPMLITSSVMYFLSGLVMFFAPNVAVILVARIVNGVAIGLAYTLNPLYISEVAPADIRGQLNTYTQFACSGGMFLAYVMVFLMSLTDSPSWRLMLGVISIPAVSYFLLTVFYLPESPRWLVSKGRILEAERVLKRLRGTDDVSGELALLAEGLSPGGEATSIEEYVVAPAGEILVNQEAGKDYIKLYGPNEGVTMVAHTVNGQGSSISRSMLSQQGSFGGLSSTGLKDPIVNLFGSLHESTLPESGGSRSMLIHNANSIFSMGEPDSPFGTGDNLHAPLMSFQGGAGERAHGSKDMLGMRSTSSLRSNSSLAHGNAVETPKNTNIGGGWQLVYKSADGVGGGKREGLQRVYLHAEPTAVSNSQHVSSFVSTSGYDIPIDGGEAYQAAALVSQSVLGTHDLLHLPEVAAKGSKWRALLEPGVKRALVVGIGLQILQQAAGINGFLYYAPQILEQAEIGALLSNLGLSSASASFLVTIITTFCMLPCIAIAIRLMDISGRRSIMLYTIPILIVCLLALIIKQFFELNSVINAAITCISVVAYESVFCMGFGVIPNIICAEIFPTSVRGICISLTSLTYWSCTLIVTLVFPTLLQLLGLPGVFGLFVLGCIISWTFVYLKVPETKGMPLEVIIEFFALGAKPGTDPAAIGIK 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03206 736 ProSitePatterns Sugar transport proteins signature 2. 120 145 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vimu7g03206 736 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 13 721 - -
Vimu7g03206 736 PRINTS Sugar transporter signature 644 656 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g03206 736 PRINTS Sugar transporter signature 522 532 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g03206 736 PRINTS Sugar transporter signature 32 42 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g03206 736 PRINTS Sugar transporter signature 115 134 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g03206 736 PRINTS Sugar transporter signature 621 642 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g03206 736 MobiDBLite consensus disorder prediction 373 407 - -
Vimu7g03206 736 SUPERFAMILY MFS general substrate transporter 22 714 IPR036259 -
Vimu7g03206 736 ProSitePatterns Sugar transport proteins signature 1. 78 95 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vimu7g03206 736 FunFam Monosaccharide-sensing protein 3 479 722 - -
Vimu7g03206 736 MobiDBLite consensus disorder prediction 384 407 - -
Vimu7g03206 736 Gene3D MFS general substrate transporter like domains 492 725 IPR036259 -
Vimu7g03206 736 Pfam Sugar (and other) transporter 497 717 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vimu7g03206 736 Pfam Sugar (and other) transporter 24 236 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vimu7g03206 736 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 709 IPR020846 GO:0022857
Vimu7g03206 736 Gene3D MFS general substrate transporter like domains 7 255 IPR036259 -
Vimu7g03206 736 FunFam Monosaccharide-sensing protein 3 19 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03206 Vimu-Chr7 27129323 27132884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03206 66 732 Organic Solute Cotransporters AT3G51490 52.639 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03206 - - gmx:100789093 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03206 7 27129323 27132884 Vimu7g03206 7 27129323 27132884 ECH
Vimu10g03774 10 46435061 46439714 Vimu7g03206 7 27129323 27132884 ECH
Vimu7g03206 7 27129323 27132884 Vimu7g03206 7 27129323 27132884 PCT