Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03173 ATGTGGAGAAGAGGAGCTGATCCTGATGGTTATGTTGCTAATTTTGTGGAAACAGAACAGATTATGCAGTTTAATGGGTATATTGCGTCGTTTGTTCAGGTGCGTGGTTCAATCCCACTCCTCTGGCAGCAAATTGTTGATTTAACTTATAAACCAAAGTTTGAGTTGTTGAAACTTGAGGAGGCTCCACGAGTCCTAGAGAGGCATTTCTTAGATTTAAGGAAAAAATACGGGGCTGTATTGGTTGTTGATCTTGTTAACACGCATGGAGGAGAAGGGCGACTATGTGAAAAATTTGGTGAAACAATGCAGCATGTGGCTAGCAATGATGTAAGATATCTGCACTTTGATTTTCACCATATTTGTGGGCATGTTCATTTCGATCGTCTCTCAATCCTTTATGAACAAATTTCAGATTTTCTGGAAAGAAACGGATATCTTCTGCTGAATGAAAAGGGAGAGAAAATGAAGGAACAACTTGGAGTTGTTAGGACCAATTGTATTGATTGTCTAGACCGTACAAATGTAACTCAGAGCATGATAGGTCGAAATATGTTGGAATATCAACTTAGAAGACTCGGTGTCTTTGGTGCTGAAGAAACCATTACTTCACATCCAAATCTGGATGAAAGCTTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGCATTCAATACTCAGGAACTCCTGCCCTTAAAGGAGACTTTGTCAGGTTTGGGCACCGCACAGTTCAAGGGATAGTACAAGATGGTTGTAATGCTCTTCTACGATATTATTACAATAACTTTCGTGATGGAACAAAGCAGGATGCAATTGATCTCATACAAGGACATTATATAGTTTCTGTCAGCCGAGATACAGCTGCCAGTTCTCAGAAAGGAGGCCTTGAAGCTATAGCTTCATTTCCCATGGCTTTTGCTCTGGTTTTGACTGGATTCCTCTTTGCAACCATGTCTTTGAGGCAAGTGCGATACGATTTTCGGCACTTCTTCTTTTCGCTAATGTGGGCGGGCATTAGTGTGGGTATAGCAGCATTTGTGAGGGCCAACGGCCGTGTTTTCTGCAACAGACCTCGCCTACACAATCCCCGGTGA 1098 0.4171 MWRRGADPDGYVANFVETEQIMQFNGYIASFVQVRGSIPLLWQQIVDLTYKPKFELLKLEEAPRVLERHFLDLRKKYGAVLVVDLVNTHGGEGRLCEKFGETMQHVASNDVRYLHFDFHHICGHVHFDRLSILYEQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETITSHPNLDESFKILWANHGDDISIQYSGTPALKGDFVRFGHRTVQGIVQDGCNALLRYYYNNFRDGTKQDAIDLIQGHYIVSVSRDTAASSQKGGLEAIASFPMAFALVLTGFLFATMSLRQVRYDFRHFFFSLMWAGISVGIAAFVRANGRVFCNRPRLHNPR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03173 365 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 1 363 - -
Vimu7g03173 365 Pfam SacI homology domain 1 122 IPR002013 GO:0016791
Vimu7g03173 365 ProSiteProfiles Sac phosphatase domain profile. 1 229 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03173 Vimu-Chr7 26895840 26907230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03173 1 365 Acyl Lipid Metabolism Gene Families AT5G66020 75.342 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03173 K21797 - gmx:100796999 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03173 7 26895840 26907230 Vimu7g03173 7 26895840 26907230 ECH
Vimu7g03173 7 26895840 26907230 Vimu7g03171 7 26889522 26894902 PCT