Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03171 ATGTGTTGTTTTCAGCGAGTTCGAGTTTCAATAATGATGGAGAAGGCAGATTCTGTGCAGAAGCTGTATACGCGCATGCGGCTCTGGGCATTTCCGGATCAGTTTGTGATTGAGCCTACGGATGGATCTTCTGGTTCTTCTTTGGCTGTTAGTCGAGTCGATGGCTCCATGAAGCTCATCGATGAGGTTCCGGAATGCAGCTCGCTTCGTGTTCCTAAGATATATACAATTTTTGGTGTTGTAGGGATGTTGAGGCTATTGGCTGGATCATATTTGCTGGTTATAACTGAGCGTGAGTCTGTTGGATCTTACTTGGGGCATCCAATTTTCAAAATTTCTTCATTGAAGGTTTTCCCATGTGATAACTCTCTTAAAAACACCCCTGCTGAACAGAAGAAAATAGAGACGGAATTTTCTGCACTGCTTAATGTTGCTGAGAAGAGCTCTGGTCTGTTCTTCTCATACGAAACTAATTTAACTCTGAGTGCACAGCGATTGAATGACTTGGGTGACGAGTCTAGATTGCTTCCACTTTGGAGACAGGCAGAGCCTCGATTCTTATGGAACAATTATATGTTAGAAGTGCTCATAGATAACAAGCTTGAACCATACTTGCTCCCTGTAGTCCAAGGCAGTATCCTTATTCGATTAACTGTTTGCAATGCTATTGTGTGA 675 0.4281 MCCFQRVRVSIMMEKADSVQKLYTRMRLWAFPDQFVIEPTDGSSGSSLAVSRVDGSMKLIDEVPECSSLRVPKIYTIFGVVGMLRLLAGSYLLVITERESVGSYLGHPIFKISSLKVFPCDNSLKNTPAEQKKIETEFSALLNVAEKSSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKLEPYLLPVVQGSILIRLTVCNAIV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03171 224 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 21 217 - -
Vimu7g03171 224 Pfam SacI homology domain 78 213 IPR002013 GO:0016791
Vimu7g03171 224 ProSiteProfiles Sac phosphatase domain profile. 142 213 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03171 Vimu-Chr7 26889522 26894902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03171 13 213 Acyl Lipid Metabolism Gene Families AT3G51460 73.134 1.33e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03171 K21797 - gmx:100796999 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03171 7 26889522 26894902 Vimu7g03171 7 26889522 26894902 ECH
Vimu7g03173 7 26895840 26907230 Vimu7g03171 7 26889522 26894902 PCT