Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02788 ATGGACGTAGGAGTCGCCGACGATCATTCCCCGGAAGCCACAATATCGCGGTGGAAATTTTCGGTGTCGCGGCAGTACCAGCACATGCTGGACAAAACGACGCCGCACGTCCTCCGCCGCTGGATCGGGTGTCTGGTGGTGGCTGCCGTCTACGTCCTCCGCGTGTACTTGGTTCAAGGCTTTTACATCGTCTCCTACGCCCTCGGTATTTACATCCTCAACCTCCTCATCGGCTTCCTCTCCCCTCAGGTCGATCCCGAGATTCATGATGGCCCCACCCTCCCCACCAGAGGATCCGATGAGTTTCGCCCCTTCGTTCGCCGCCTCCCGGAGTTCAAGTTCTGGTACTCGATCACAAAGGCGTTTTGCATTGCATTTGTGATGACTTTCTTTAGTGCCTTTGATGTTCCAGTATTCTGGCCGATACTCCTTTTCTACTGGGTGGTCCTTTTCACACTTACAATGAGGAGACAGATATCGCACATGATCAAATATAAATATGTTCCATTCTCATTTGGGAAACAGGATTGCATCCTTGTTGCTAATAGTAAGCATTTTGTCTATTTTACTTTTAGCGCTATGATGGAAAGAGAGCACCAGCAGATAGCACAAGTCCAATCGCGGACTGAAATTTTCAGTTTAATTGAACTTTATTTGCTACATTTAAGTCACAATCCCGAATGTGGCTTGATACCATCTACAGTATTTGCTACAATTAACAGCTGGAGCAACCTGAGGATTTGGTGGCTGTGGAAGATTGCTTTGAGGTCTAGCATGGACGTATGA 786 0.4822 MDVGVADDHSPEATISRWKFSVSRQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVQGFYIVSYALGIYILNLLIGFLSPQVDPEIHDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQDCILVANSKHFVYFTFSAMMEREHQQIAQVQSRTEIFSLIELYLLHLSHNPECGLIPSTVFATINSWSNLRIWWLWKIALRSSMDV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02788 261 PANTHER PROTEIN RER1 6 177 IPR004932 GO:0016020
Vimu7g02788 261 Pfam Rer1 family 19 175 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02788 Vimu-Chr7 23458648 23460232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02788 1 175 Miscellaneous Gene Families AT4G39220 71.348 3.31e-91 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02788 - - gmx:100805147 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02788 7 23458648 23460232 Vimu7g02788 7 23458648 23460232 ECH
Vimu10g03623 10 45567510 45569321 Vimu7g02788 7 23458648 23460232 ECH
Vimu7g02788 7 23458648 23460232 Vimu7g02788 7 23458648 23460232 PCT