Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03623 ATGGAGGGAAGTGGCAGTGGCGGTGGCGCTGCTCCGTCGTCTGCGCCGGTGAAGCAATATCTGCAGGAGTTCTCTAAGCTATTTCAGTACTATCTGGACAAATCTACCCCCCATTCCGCCTACAGATGGATTGGGACATTGGTCATGGCATCCATCTACGTCTTGCGTATTGTTTACGTGCAGGGGTTTTACGTTGTCTCTTACGGCCTCGGAATCTACCTCCTCAATCTTTTGATTGGTTTTCTCTCACCTTTGGTTGATCCAGAGCTCGATCCCTCCAACTCCCCTTTGCTTCCCACCAAAGGATCCGATGAGTTCAAACCCTTCATTCGCCGCCTCCCTGAGTTTAAGTTCTGGTATTCTTTCACCAAGGCCCTCTGCATAGCGTTTGTGATGACCTTCTTTTCCCCGTTTGATGTTCCTGTCTTTTGGCCTATATTACTCTGTTACTGGTTTGTTCTCTTTGTCCTTACAATGAGGCGCCAAGTTGCACACATGATCAAATACAAATATATCCCATTTAACTTGGGGAAGCAGAAGTATACTGGTAAGAAATCTTCTGCAGGTAGCAGTGGCTCTCGAGCAGACTGA 591 0.4772 MEGSGSGGGAAPSSAPVKQYLQEFSKLFQYYLDKSTPHSAYRWIGTLVMASIYVLRIVYVQGFYVVSYGLGIYLLNLLIGFLSPLVDPELDPSNSPLLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFSPFDVPVFWPILLCYWFVLFVLTMRRQVAHMIKYKYIPFNLGKQKYTGKKSSAGSSGSRAD 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03623 196 Pfam Rer1 family 21 182 IPR004932 GO:0016020
Vimu10g03623 196 PANTHER PROTEIN RER1 13 188 IPR004932 GO:0016020
Vimu10g03623 196 PIRSF AtER_Rer1p 6 192 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03623 Vimu-Chr10 45567510 45569321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03623 4 196 Miscellaneous Gene Families AT2G21600 72.680 1.82e-104 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03623 - - gmx:100499765 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03623 10 45567510 45569321 Vimu10g03623 10 45567510 45569321 ECH
Vimu10g03623 10 45567510 45569321 Vimu7g02788 7 23458648 23460232 ECH