Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu7g02759 | ATGAAAACCAAAACGGTTAAGGGAAATTGGAGATGGAATTGGAGGACGAACAGGCTCGGCTTGCCTTTCGTCTTCCTTATATGCATCTTCTTCTTTCTCGCTGGATTCTTTGCTTCCAGTCTTTTCTCTCACTATCAGGAACGTGAAGATGACGTGAGGCTGATGCCGAGAGCGAGAGCGAGGTTAACTGGAAAATCGACGGAGGAGGAGACGGAATATAATTTGTTGCAAGCTGGAGAGTCCGGAGATGATTCCATTACATTGATTCCTTTTCAGGTTTTGAGCTGGTACCCTCGCGCTCTGTATTTTCCTAATTTTGCGAGTGCACAACAATGTGAAAGCATAGTTAAAAAGGCAAGGGTAGGACTCAAGCCATCAACATTGGCGTTACGTAAGGGAGAAACGGAGGAGAATACAAAGGGAATCAGAACAAGCTATGGTGTTTTCATGAGTGCTTCCGAGGATGAAACGGGGACTTTATATGCCGTTGAGGAGAAAATTGCCAGAGCAACAAAACTTCCTAGATCTCATGGAGAGGCATTTAATATCCTACGCTATGAGGTTGGACAGAAATACAATTCTCATTATGATGCATTTGATTATGCTGAATATGGCCCACAAAAGAGCCGACGGGTAGCTTCTTTTTTGCTGTATTTGACTGATGTTCCAGAAGGTGGGGAGACCATGTTTCCGTTTGAGAACGGATTCAACATGGACGGTAACTATAATTTCGAGGACTGTATTGGTTTAAAAGTAAAGCCACGCAAAGGAGATGGGCTTCTATTTTATTCACTATTACCTAATGGTACAATCGATCAGACATCACTCCACGGAAGCTGTCCCGTCATAAAAGGAGAGAAGTGGGTGGCAACAAAGTGGATAAGGGATCAAATACAAGACGATTAA | 906 | 0.4338 | MKTKTVKGNWRWNWRTNRLGLPFVFLICIFFFLAGFFASSLFSHYQEREDDVRLMPRARARLTGKSTEEETEYNLLQAGESGDDSITLIPFQVLSWYPRALYFPNFASAQQCESIVKKARVGLKPSTLALRKGETEENTKGIRTSYGVFMSASEDETGTLYAVEEKIARATKLPRSHGEAFNILRYEVGQKYNSHYDAFDYAEYGPQKSRRVASFLLYLTDVPEGGETMFPFENGFNMDGNYNFEDCIGLKVKPRKGDGLLFYSLLPNGTIDQTSLHGSCPVIKGEKWVATKWIRDQIQDD | 301 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu7g02759 | 301 | Pfam | 2OG-Fe(II) oxygenase superfamily | 182 | 295 | IPR044862 | - | |
| Vimu7g02759 | 301 | FunFam | Prolyl 4-hydroxylase 4 | 90 | 296 | - | - | |
| Vimu7g02759 | 301 | Gene3D | q2cbj1_9rhob like domain | 91 | 295 | - | - | |
| Vimu7g02759 | 301 | ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 176 | 296 | IPR005123 | - | |
| Vimu7g02759 | 301 | PANTHER | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT | 69 | 295 | IPR045054 | - | |
| Vimu7g02759 | 301 | SMART | p4hc | 98 | 295 | IPR006620 | GO:0005506|GO:0016705|GO:0031418 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu7g02759 | Vimu-Chr7 | 23214811 | 23221282 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu7g02759 | K00472 | - | gmx:100811904 | 488.804 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu7g02759 | 7 | 23214811 | 23221282 | Vimu7g02759 | 7 | 23214811 | 23221282 | ECH | |
| Vimu7g02759 | 7 | 23214811 | 23221282 | Vimu3g03370 | 3 | 47008434 | 47011129 | PCT |