Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02619 ATGACCGCCTCTCAACTCATCTCTGTTAGTCCCGACGAACTCCGCTTCCATTTTGAGTTGGAGAAGCAGACGTTTTGCGATCTTAAGGTCCTCAATAACACACAGAATCATGTTGCTTTCAAGGTCAAAACCACTTCTCCCAAGAAATACTTTGTACGACCTAACACCGGTGTCGTACACCCCTGGGACTCCTGTATCATCAGAGTCACCCTCCAAGCCCAACGGGAATACCCTCCAGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAATAGTGAGTCCAAATACTGATGTTGACGACCTCCCACCAGATACTTTTAATAAGGAAAGTGGTAATTCAATAGAGGAGTTGAAATTAAGAGTTGCATATATCTCTACTGGCTCACCCGAAGGAAGCTCTGAAGATGATGCATCAAGGAGCACACATAAACTCGATTCCTCTTCTAGTCAGGTTTTACAGAATCTGAAGGAAGAAAGAGATGCCGCTGTCAGACAAACGAGACAGCTGCAACAGGAACTGGACATGCTGAAAAGACGAAGAAACAGAAAAAGTGATCCTGGCTTTTCCTTCATCTTTGCCATTTTTGTGGGTGTTCTTGGAGTTTTACTTGGCTTTCTTTTTAAACTCTTGTTCTCTTCTCCATCTAGAGAATGA 660 0.4318 MTASQLISVSPDELRFHFELEKQTFCDLKVLNNTQNHVAFKVKTTSPKKYFVRPNTGVVHPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVSPNTDVDDLPPDTFNKESGNSIEELKLRVAYISTGSPEGSSEDDASRSTHKLDSSSSQVLQNLKEERDAAVRQTRQLQQELDMLKRRRNRKSDPGFSFIFAIFVGVLGVLLGFLFKLLFSSPSRE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02619 219 FunFam Vesicle-associated protein 1-1 1 129 - -
Vimu7g02619 219 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 208 IPR016763 GO:0005789
Vimu7g02619 219 Gene3D Immunoglobulins 2 128 IPR013783 -
Vimu7g02619 219 Pfam MSP (Major sperm protein) domain 7 104 IPR000535 -
Vimu7g02619 219 SUPERFAMILY PapD-like 3 134 IPR008962 -
Vimu7g02619 219 MobiDBLite consensus disorder prediction 128 154 - -
Vimu7g02619 219 Coils Coil 154 181 - -
Vimu7g02619 219 PIRSF VAMP_assoc_prot 126 211 IPR016763 GO:0005789
Vimu7g02619 219 PIRSF VAMP_assoc_prot 1 156 IPR016763 GO:0005789
Vimu7g02619 219 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02619 Vimu-Chr7 22116864 22120451 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02619 - - gmx:100794270 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02554 7 21686993 21691599 Vimu7g02619 7 22116864 22120451 PCT