Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02554 ATGACCACGTTCTCGACCACAGAGAAAATAGAAAAGAAAAGGAAGTTGAATGAGAATCCCTCCTCTCTGTTATCCATCCAATCCATTCAGTCTCCTCAATCGCATTCCGAGATGAGCACCGGCGACCTTCTCAGCATCGAACCTCTTGAACTGAAGTTCATATTTGAGCTCAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCAAATAAGACCGATAGCTATGTAGCTTTCAAGGTGAAAACGACCAATCCAAAGAAATATTGTGTTCGTCCAAACACTGGAATTGTCTTGCCACGATCTACATGCGATGTTATCGTTACCATGCAAGCGCAAAAGGAAGCTCCGGCTGACATGCAATGCAAGGATAAGTTTCTTCTTCAAAGCGTAAGAGTAGAGGACGGAATCGCCGCAAAGGATATCACTGCAGAAATGTTCAACAAGGAAGCGGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGTTGTATGTCTCTCCGCCTCAACCTCCGTCTCCAGTCCCGGAAGGTTCCGAGGAAGGATCATCACCTAGAGGTTCTGTTTCCGACAATGGAAATATCAGTGGTGCTGACTCCGCTGCAGTAACAAGAGCATTTGCTGAACGACATGATGGTCCAGAAAAGTCTGTAGAGGCAAAAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCTATCCAACAAAATAACAAGCTTCGTCAGGAACTGGACATGCTGAGACGGGAAAGCAACAAAAGTCGTGGGGGTGTCTCGATGGTCATTGTCATATTAATTGGCTTACTTGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA 837 0.448 MTTFSTTEKIEKKRKLNENPSSLLSIQSIQSPQSHSEMSTGDLLSIEPLELKFIFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVRVEDGIAAKDITAEMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSDNGNISGADSAAVTRAFAERHDGPEKSVEAKALISRLTEEKNNAIQQNNKLRQELDMLRRESNKSRGGVSMVIVILIGLLGIIMGYLMKKT 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02554 278 Gene3D Immunoglobulins 36 167 IPR013783 -
Vimu7g02554 278 PIRSF VAMP_assoc_prot 36 277 IPR016763 GO:0005789
Vimu7g02554 278 SUPERFAMILY PapD-like 33 178 IPR008962 -
Vimu7g02554 278 Pfam MSP (Major sperm protein) domain 44 148 IPR000535 -
Vimu7g02554 278 FunFam Vesicle-associated protein 1-1 38 166 - -
Vimu7g02554 278 MobiDBLite consensus disorder prediction 164 192 - -
Vimu7g02554 278 Coils Coil 214 248 - -
Vimu7g02554 278 ProSiteProfiles Major sperm protein (MSP) domain profile. 43 163 IPR000535 -
Vimu7g02554 278 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 41 275 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02554 Vimu-Chr7 21686993 21691599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02554 - - gmx:100791280 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02554 7 21686993 21691599 Vimu7g02554 7 21686993 21691599 ECH
Vimu7g02554 7 21686993 21691599 Vimu7g02554 7 21686993 21691599 PCT
Vimu7g02554 7 21686993 21691599 Vimu7g02619 7 22116864 22120451 PCT