Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02611 ATGATGCAGTTCAGCTCCACCGTACCAGCCCACAACCTTCACAAGTTCCAGGCAATAAGGTGCCCCAGCTTCAGCTTCAGATGCCAAGCCTCCTCTTCCTCAACCTTTCAGAAGCCCTTTGTCTCCACCGAGTCAACTCGCCTGCACCTCGCCAACCTCGACAAGCTCCTCGAGACCCAGAAGCCCGTGGACCCACCCTCTCAACTCCACCACCACCAACAGCACCCACACCAACCCATCATCAACCACCCTAAGGAAAAGAAAGGAAGAAGCTTTCTCGAAGGCCTCAACTTGGCAAGGCTCTGGCCGGAGATGAAGGCGAACGAGGAAATGTCCCCGCGCCACCTCAATCGCCTCCAGCGGCTGCTCTCCATGACGGCGGAGTATTCCCCGAGGAACATCCTCGGCGGGCGGTGGAGAGAGTACCACGGCAGCAACGACTGGAAAGGGATGTTGGATCCTCTGGACGAGAATCTCCGGCGAGAAGTCGTCCGCTACGGAGAATTCGTCCAAGCCGCGTATCAGGCTTTTCACTCCGACCCTGCCATGTCAACAGAGGAGCCGCCACACCCCCGCCACGTGTCTCTTCCCGATAGATCGTACAGAGTGACGAAAAGCCTCTACGCCACGTCATCGATCGGGTTGCCGAAATGGGTGGATGACGTGGCTCCGGATCTTGGATGGATGACCCAGCGGTCGAGCTGGGTCGGATACGTGGCGGTTTGCGAAGACAGAAGAGAGATCGCACGGATGGGAAGGAGAGACATTGTTATCTCTCTCCGGGGAACCTCGACGTGTCTGGAATGGGCCGAGAATATGAGGGCCCAATTGGTTGACCTCGAGGATGTTCCGGAAGGGCAAGGAAAGCCCAAGGTGGAGTGTGGGTTCATGAGTCTGTACAAGACGAAAGGTGCACACGTGGCGAGTCTGTCAGAGTCCGTTGTGGAGGAAGTGAAGAGACTCGTCAATCTGTACAGAGGCGAAGAGTTAAGCATTACCGTTACAGGACACAGCCTGGGAGCGACGCTGGCGCTATTGGTGGCCGATGAAATAAGCACGTGTTGCGCCGGAGTTCCACCGGTGGCTGTTTTTTCGTTCGGCGGGCCGCGCGTGGGGAACAAAGCCTTCGGCGATCGTGTGACGGCGAAGAACGTGAAAGTTTTGCGAATAGTGAATTCGCAGGACGTGATTACGCGCGTGCCTGGGATCTTCGTGAGCGAGGAGCTTGAAGAGAAAATACGGAGAGTGGGAGGGGGAGTGTTGGAGGAGACGACGCCGTTGGCGTACTCGCACGTGGGAAGTGAGCTGCGCGTGCAGACGAAGATGTCGCCGTACCTTAAGCCGGACGCGGACATGGCGTGTTGCCATGATTTGGAGGCTTACTTGCATTTGGTGGATGGATTCCTGGCGTCGAATTGTCCGTTCAGAGCGAATGCAAAGAGAAGCTTGGCGAGGTTGATGCAAGATCAAAGCGCCAATGTAAAAAAATTGTACACTAGCAGGGCTAAAGCCTTAACTGTTAATCTCTCTAGACAGGGATCCATCTCCATGTCTAATTGTTTACCAAGTCCATCTTAA 1578 0.5558 MMQFSSTVPAHNLHKFQAIRCPSFSFRCQASSSSTFQKPFVSTESTRLHLANLDKLLETQKPVDPPSQLHHHQQHPHQPIINHPKEKKGRSFLEGLNLARLWPEMKANEEMSPRHLNRLQRLLSMTAEYSPRNILGGRWREYHGSNDWKGMLDPLDENLRREVVRYGEFVQAAYQAFHSDPAMSTEEPPHPRHVSLPDRSYRVTKSLYATSSIGLPKWVDDVAPDLGWMTQRSSWVGYVAVCEDRREIARMGRRDIVISLRGTSTCLEWAENMRAQLVDLEDVPEGQGKPKVECGFMSLYKTKGAHVASLSESVVEEVKRLVNLYRGEELSITVTGHSLGATLALLVADEISTCCAGVPPVAVFSFGGPRVGNKAFGDRVTAKNVKVLRIVNSQDVITRVPGIFVSEELEEKIRRVGGGVLEETTPLAYSHVGSELRVQTKMSPYLKPDADMACCHDLEAYLHLVDGFLASNCPFRANAKRSLARLMQDQSANVKKLYTSRAKALTVNLSRQGSISMSNCLPSPS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02611 525 Pfam Lipase (class 3) 257 403 IPR002921 GO:0006629
Vimu7g02611 525 SUPERFAMILY alpha/beta-Hydrolases 160 468 IPR029058 -
Vimu7g02611 525 Gene3D alpha/beta hydrolase 138 514 IPR029058 -
Vimu7g02611 525 MobiDBLite consensus disorder prediction 61 84 - -
Vimu7g02611 525 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 45 502 - -
Vimu7g02611 525 CDD Lipase_3 192 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02611 Vimu-Chr7 22085827 22088569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02611 26 525 Acyl Lipid Metabolism Gene Families AT4G16820 57.946 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02611 - - gmx:100806573 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02611 7 22085827 22088569 Vimu3g03321 3 46664015 46668302 PCT