Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03321 ATGAGACTAAACGGAGAAATCTCAAGCGGGGAAGACGAAAAGGAGAAGCAACCGGGAACGACAACGTTTTCGGGGCAGAAAGTGGTGGTTGGGTACGCCTTAACGTCGAAGAAGAAAAAGAGCTTTCTGCAGCCAAGTTTCACTGGCCTTGCACGGTCAAATCTTGTTTGTTGTCTGTTCACTGACAAGACTGCTGCCAACTGGGCATTAGAATTAGAGGAAATCGAATTACTATCTCTGAATAAATTGCCAACAAAATCCTCTGCTACTCTCTTGAGACTCTTAATAGTGAAGTGTAAAAATGTTGTACGATGCAGGAACATGGGGATAATCTTTGTTGCTGTTGATCTAAAGAAGCCACTAACAGAACAAGGTCCTTTTGACATTATCTTGCATAAGTTATCAGGGGAGGAGTGGCATGAGATTATTGAGGTTAGTGAACTCCTGACACTTCTACCCACTTCCACACTAGTTCATGCTCTCCTCATCATGAATCATGATCAGATAGTTGAAATCAGTCCCCAAGTGTTCAAACAAGATTATAGGCAAAAACATCCCGAGGTAACTGTTCTTGATCCTCCCGATGCAATTCGACACTTGCACAATCGCCAATCCATGCTGCAAGATGTGGTGGATCTGAACTTATCCGATTGTCATGGCAAGGTTTCCATTCCACGTCAGTTGGTTATCACAAAAGAGAAAGACCCGTCTAGTATCCCTTATGAAGTTACTAAAGCTGGGATGAAGTTGCCATTAGTTGCAAAACCGCTAGTTGTGGATGGCACTGCGAAGTCACATGAACTATTTCTTGCTTATGACGAATTCTCTTTATCAGAGCTTGAACCTCCTCTAGTTCTACAGGAGTTTGTCAATCATGGTGGCCTTCTTTTTAAGATTTACGTTGTCGGGGAAACCATAAAGGTTGTGAGGCGTTTCTCTCTTCCTAATATCAGTAAGCGTGAGCTATCAAAAGTTGCAGGTGTGTTCCGTTTCCCAAGAGTTTCATGTGCAGCAGCTTCTGCAGATGATGCTGATCTAGATCCTAATATCGCAGAACATCCCCCTACACCTTTATTGGAGAAGCTTGCGAGAGAGCTCCGTCATAGATTGGGACTCCACTTGTTCAACATAGATATGATTAGAGAATATGGAACCAAGGATGTGTTTTACGTAATCGACATCAACTACTTTCCTGGCAAGTATCTCTGGCCACACACACATTCTGTGGTATGGGAAAATGCCAGGTTACGAGCACGTATTTACAGATTTTCTACTTAG 1278 0.4296 MRLNGEISSGEDEKEKQPGTTTFSGQKVVVGYALTSKKKKSFLQPSFTGLARSNLVCCLFTDKTAANWALELEEIELLSLNKLPTKSSATLLRLLIVKCKNVVRCRNMGIIFVAVDLKKPLTEQGPFDIILHKLSGEEWHEIIEVSELLTLLPTSTLVHALLIMNHDQIVEISPQVFKQDYRQKHPEVTVLDPPDAIRHLHNRQSMLQDVVDLNLSDCHGKVSIPRQLVITKEKDPSSIPYEVTKAGMKLPLVAKPLVVDGTAKSHELFLAYDEFSLSELEPPLVLQEFVNHGGLLFKIYVVGETIKVVRRFSLPNISKRELSKVAGVFRFPRVSCAAASADDADLDPNIAEHPPTPLLEKLARELRHRLGLHLFNIDMIREYGTKDVFYVIDINYFPGKYLWPHTHSVVWENARLRARIYRFST 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03321 425 MobiDBLite consensus disorder prediction 1 21 - -
Vimu3g03321 425 PIRSF ITPK 9 65 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vimu3g03321 425 PIRSF ITPK 93 417 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vimu3g03321 425 Gene3D - 193 399 - -
Vimu3g03321 425 MobiDBLite consensus disorder prediction 1 18 - -
Vimu3g03321 425 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 25 406 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vimu3g03321 425 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 29 54 IPR041429 -
Vimu3g03321 425 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 102 197 IPR041429 -
Vimu3g03321 425 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 193 404 - -
Vimu3g03321 425 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 219 400 IPR040464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03321 Vimu-Chr3 46664015 46668302 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03321 K00913 - gmx:100127410 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02611 7 22085827 22088569 Vimu3g03321 3 46664015 46668302 PCT