Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02470 ATGGCTCACTCACACTCACTTAGCTCACTTAGCTCCCTTCTCATCCTTGCCTCATTATCTCTCGCCACCGCTGCAAACTTCGAGATCGTCAACAACTGCCCCTACACGGTATGGGCAGCAGCCAGCCCCGGCGGCGGGCGGCGCCTGGATCGCGGCCAGACGTGGAACCTATGGGTGAACCCAGGCACTGCCATGGCCCGCATATGGGGCCGCACAGGGTGCAACTTCGACGGCAGTGGGCGCGGTCGGTGCCAGACCGGTGACTGCACCGGCGGCCTAAACTGCCAGGGCTGGGGCGTCCCTCCGAACACCCTGGCGGAGTTCGCCCTGAACCAATACAACAATCTGGACTTCTACGACATCTCCCTGGTGGATGGTTTCAACATCCCGATGGACTTCTACCCCGTGAACGGTGGGTGTCATAGAATCAGTTGCACTGCAGACATTAATGGGCAGTGCCCAGGCCCATTGAGGGCCCAAGGTGGATGCAACAATCCATGCACTGTGTTTAAGACGAACGAGTATTGCTGCACGAATGGGCAAGGAAGCTGTGGGCCGACAAGCTACTCTAAGTTCTTCAAGGAGAGATGCCGTGATGCTTACAGTTACCCTCAGGATGACCCTACAAGCACCTTTACATGCCCTGCTGGTTCTAATTACAGGGTTCTCTTCTGTCCTCTCGGGGAACCTCTTCTTCCTCTTCACATGCTTCCTAGTAATACCACAAATCAATACTGA 738 0.561 MAHSHSLSSLSSLLILASLSLATAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLWVNPGTAMARIWGRTGCNFDGSGRGRCQTGDCTGGLNCQGWGVPPNTLAEFALNQYNNLDFYDISLVDGFNIPMDFYPVNGGCHRISCTADINGQCPGPLRAQGGCNNPCTVFKTNEYCCTNGQGSCGPTSYSKFFKERCRDAYSYPQDDPTSTFTCPAGSNYRVLFCPLGEPLLPLHMLPSNTTNQY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02470 245 FunFam Thaumatin I 25 226 - -
Vimu7g02470 245 SUPERFAMILY Osmotin, thaumatin-like protein 25 226 IPR037176 -
Vimu7g02470 245 SMART tha2 27 226 IPR001938 -
Vimu7g02470 245 Gene3D Thaumatin 24 227 IPR037176 -
Vimu7g02470 245 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
Vimu7g02470 245 Pfam Thaumatin family 31 226 IPR001938 -
Vimu7g02470 245 PIRSF PR5 1 244 IPR001938 -
Vimu7g02470 245 PANTHER OS03G0233200 PROTEIN 14 226 IPR001938 -
Vimu7g02470 245 PRINTS Pathogenesis-related protein signature 216 225 IPR001938 -
Vimu7g02470 245 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Vimu7g02470 245 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Vimu7g02470 245 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Vimu7g02470 245 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Vimu7g02470 245 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Vimu7g02470 245 ProSiteProfiles Thaumatin family profile. 24 226 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02470 Vimu-Chr7 21119462 21120199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02470 9 226 Receptor kinase-like Gene Family AT5G38280 36.585 4.44e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02470 - - gmx:100240704 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02470 7 21119462 21120199 Vimu11g04364 11 64959115 64962903 PCT