Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02468 ATGCGGAGTGATATTATAAGAGACCTTCCTTCCTATGTCCGCGTGATTCAGATTGTGCAGGAGAAAAACCTACATAGAAGAGTAGATAATCAAAAGTACCAGCACGGAGTTTATCGATTTGCAAATCTGAGAGTAAAACCTTGTGCTCCGATTACTATCATTTTTTTACGTCAGATGGCGTTTCAGGAAAAGGGAAACAGGTTTAAAAGGCAGCCGGAGAAGAATTCTTCGGCTTCAAACAATGGAAGAACTCCAGGTGCTGTAAAATTCTCGAACGACACGGAAAGACTTCAACATGTTAATAGCATACGCAAAGCCCCAGTAGGGGCTCAGATGAAGCGTGTTATTGATCTCCTTTTTGAGACCCGAAAGGCTTTAACGATGGAGCAAATAAATGAAGCGTGTTATGTGGACATGAGAGCTAATAAAGATGTTTTTGAGAGTATGCGGAAAAACCCAAAAGTAAAATATGATGGGGAAAGATTCTCTTACAAGTCCAAGCATGATGTTAGGGACAAAAGTCAGCTGCTTGTCCTGGTGCGTAAGTTTCCAGAGGGCATTGCTGTTGTTGACCTAAAAGATTCTTACCCAACTGCTTTGAAAGCTTCAAGGGAGGTTTGGCTGTTATCTAACTTTGACTCACAAGAGGACATTGCCTACCCGAATGATCCTAAAGTGCCCATTAAGGTGGATGATGACCTAAAACAGCTTTTTCGGGAGATTGAATTGCCTCGTGATATGATTGACATAGAGAGGGATCTACAAAAGAACGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGGAGTGCAGCGCAAATGGAAGGCATTTCAACAAAGCCTAAACCGAAGAAGAAGAAGAATGAAATCACTAAGAGGACCAAGCTGACTAATGCCCATCTTCCGGAGCTTTTTCAGAATTTAAAATGA 930 0.4183 MRSDIIRDLPSYVRVIQIVQEKNLHRRVDNQKYQHGVYRFANLRVKPCAPITIIFLRQMAFQEKGNRFKRQPEKNSSASNNGRTPGAVKFSNDTERLQHVNSIRKAPVGAQMKRVIDLLFETRKALTMEQINEACYVDMRANKDVFESMRKNPKVKYDGERFSYKSKHDVRDKSQLLVLVRKFPEGIAVVDLKDSYPTALKASREVWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFREIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISTKPKPKKKKNEITKRTKLTNAHLPELFQNLK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02468 309 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 96 171 IPR003166 GO:0006367
Vimu7g02468 309 Pfam TFA2 Winged helix domain 2 171 222 IPR040501 -
Vimu7g02468 309 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 69 309 IPR016656 GO:0005673|GO:0006367
Vimu7g02468 309 MobiDBLite consensus disorder prediction 67 91 - -
Vimu7g02468 309 MobiDBLite consensus disorder prediction 72 88 - -
Vimu7g02468 309 MobiDBLite consensus disorder prediction 260 309 - -
Vimu7g02468 309 Pfam TFIIE beta subunit core domain 110 170 IPR003166 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02468 Vimu-Chr7 21101707 21105134 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02468 K03137 - gmx:100788089 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02468 7 21101707 21105134 Vimu11g04368 11 64983265 64985697 PCT