Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02466 ATGAAAATGGATTTTGAGGGTGTACTCGTAGTGCTGAATTATGATGGGACGAGAATCAACATGGTAAATGAGTTGTCGTGTTTGATAATTGAATTTCAGGTGTTTCAATCTGGAATGGATGCATTGGTTCTGTCTATAGTTCCAGGAGACATTGGAAAGCCAACTACGAAATTGGAGAAAGCTGCAGTTCGAGATGGAACTTGCAGATGGGACAATCCGGTGTATGAAACTGTGAAATTTGTTCAGGAGTCTAAGACTGGGAAAATCAGTGATAGAATATATCATTTTTTGGTTTCAACGGGTTTACCAAAAGCTAGTTCCATTGGGGAGGTTTCTATAAACTTTGCTGATTACGTGGAGACCACAAAGCCCTCCTCTGTTTCTCTTCCCATCAGGATTTCTCATTGTGATGCTGTTTTGCATGTATCAATTCAGAGGCTGCAAGAAAACGGTGATCGAAGGTACCAGGGGGGAATTGCCATGTTATTATATATTTTTGCCTTTCAGGTTAAAGAGTTTGCCTCGGCTCAGTTTCTGATGATGCGAGAGGAAGATGAATGCGAAGATTCCAAACTGAAATCCGACGATAGGAGCTCAAGGAAACAATTGAACAACGGCGATACGGATGAAACCAGCAAAAGTTATTCTTCTGAAGATGTCTCTGCCAAAGCAATTGTCAATAGAGCTGAATTGAGTTCTAATTACAGGACATCCAGCGGCTCTGATATGACATTGTCAAGTTCTGATGACAGCTCTGGACTGGATACTCCCCGCGAAATTGGAACAAGAAAAAAGAACATCCACCTCAACACCAAAGGGTTTCTTCCAAATCCTGTTCTGCAGCATGCTTCAGAACCTCAAAACCTTGCTCTCAATGCCTCAACATCAATGCATGATGTGCATCAGAGATCACACTGGGACTGGTCAGCCGGGTCGGAGCACAGGCTAAGTACAGATGATGCAACATATGGCTCTCATCATAATTCTCTTCTAAAGGAAAGCTCCCAACAACCTTCCCCTTTAGAGATTGAAAGTCTCACAGCTGAACTAGCTGCTTTGGCCAGGCAGGTAGAGGTGTCGGACTTGGAATTACAGACTCTTAGGAAGCAAATTATGAAGGAATGCAAAAGAGGGCAGGATCTTACGAAGGAAATCGTTGTCTTGAAAGGGGAAAGGGATGCATTCAAGACAGAATGTGACAGTCTCAGGTCTTTTCAGAAACGCATGGAAGAGGCCAAAGTGAGAAACAGATCACAGTTGGAAGGTGGAGACCTTCATGCTCTTGTTGAAGAAATAAGAGAAGAATTGGATTATGAGAAAGACCTCAATGCAAATCTCAGGTTACAGTTAAAGAAGATGCAAGAATCTAATGCCGAACTGGTTCTTGCTGTGCAGGACCTGGATGAAATGTTGGAGCAGAAAAATAGTCATATGTGTAACCATTCCTATTCAAACGACCGGGATAAAATTTCAGCGGAGAAAAAGATAAACCTCTCTAAATGTGAATCGGATGATGATGATGAAGAACAGAAAGCATTGGACGAGCTGGTTAAGGAACACGCCGAAGCCAAGGAGACACACTTACTGGAGAAGAAAATAGTAGACCTCTATGGTGAAATAGAGATGTACAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAACAGCTCGCCCTGGACTATGAGATATTGAAGCAGGAAAACCATGGCCTTGCATATAAGCTGGAGCAAAGCGAACTGCAAGACCAGCTGAAAATGCAGTACGAATGTTCATCTTCTCCTTCTGCAATGAATGATATTGAAATCCACATCAAGAATCTGGAAAATCAACTAAAGGAACAATCAGAAGATTTCACAAATTCTCTGGCTACCATCAAGGCACTCGAAACCCATATCAGAAAATTGGAAGAGGAAATGGAGAAGCAAACACAAGGATTTGAAGCTGATCTAGAAGCAGTGACGCGTGACAAAGTTGAACAAGAACAGAGAGCTATCCAAGCGGAGGAAGCTTTTCGAAAGATCAGACTGAAAAATGCTAAAACTGCCGAGAGGCTACAAGAGGAATTCCGAAAGCTCTCCACACAAATGACCTCAACATTTGATGCGAACGAGAAGGCTACCATGAAAGCATTGACAGAAGCGAGTGAAGTGCGTGCGCAGAAAAAGGTACAGGAGGAAGAGCTGCATAAAGTCAAAGAAGAACTTGAGTCAACTACTGCTGAGTATGAGGTAAAACTGAACCAACTTTCCAACCAAGTAGATATGATGAAAGGGCAGATACAACAGATGTTGTTGGAAATTGAGGACAAGTCCAAGCAGCTTGAAAATCAGAAGAAGCACGAGGAACAGGTCAGTAGGGATTTCTCTAATGAGATCGGATTACTAAAAGCTGAGATTGGAAAGCTTAACATGGAGATTTCATGCTTACTTGAGCAAGTAGAAGATAAGGAAATTTTAAAAACTGATTTGGAAATTATGAAGAAATCAGTAGAGGAATTTGAGACACTTTTACAGAAAGGAAGTGTGGAAAGAAATGAACTGTTGGCAACAAATGAGTTGTTGAAGAGGGAGGCAGAAGAGTCACTTAATGAGCTAAACAGAATCATCCATCAAAAGGATGAAAAAGAAACTGAGGTCAGAGTCTTGCAGTCAGAGTTGGAGGCCGTCAGAGCTCAGTACAATGACCTGAAACACTCTATTTCTAAGGAAGAAGTTGAGAAAGAAAAACTGCTAAAGCAAGTTTTCCAGCTAAAGGCTGAATTGAAGAAGAAAGATGATGCTTTAATCAGCTCCGAGAAGAGGTTCAGGGAAAGTAGTGCACGCGCACAACTTAACGATGGAACTAAAAATATTCTAAAGAACAAAAAAACTGCTTCAGTTCCTCAGAATTCAAAGGAAATAGCCACTCTGAAGGAGAAAATAAAAACGCTTGAGGGCTTGATACAGACAAAGGAAACAACCTTGGAAACTTCAACAACTTCATTTTTGCAGAAGGAAAAGGAACTCCAGACCAAAATTGAGGAGCTGGAGAACAGAGTAGAGGAATTCAACCGAAGTGTTGCTTTGCAGAAGGATAGAAGTTTTACTACTTCCAATGAGATATCTGCTGAGCTAACATCTTTGAAGGAAAGAAACAAATCAATGGAAAGCGAACTTAAAGAGATGCAAGAGAGATACTTAGAAATGAGCCTCAATTTTGCGGAGGTAGAAGGTGAAAGACAAAAGCTTGTCATGGCTGTACGGAATCTCAAGAGTACCCAGAAAGGCTAA 3270 0.4144 MKMDFEGVLVVLNYDGTRINMVNELSCLIIEFQVFQSGMDALVLSIVPGDIGKPTTKLEKAAVRDGTCRWDNPVYETVKFVQESKTGKISDRIYHFLVSTGLPKASSIGEVSINFADYVETTKPSSVSLPIRISHCDAVLHVSIQRLQENGDRRYQGGIAMLLYIFAFQVKEFASAQFLMMREEDECEDSKLKSDDRSSRKQLNNGDTDETSKSYSSEDVSAKAIVNRAELSSNYRTSSGSDMTLSSSDDSSGLDTPREIGTRKKNIHLNTKGFLPNPVLQHASEPQNLALNASTSMHDVHQRSHWDWSAGSEHRLSTDDATYGSHHNSLLKESSQQPSPLEIESLTAELAALARQVEVSDLELQTLRKQIMKECKRGQDLTKEIVVLKGERDAFKTECDSLRSFQKRMEEAKVRNRSQLEGGDLHALVEEIREELDYEKDLNANLRLQLKKMQESNAELVLAVQDLDEMLEQKNSHMCNHSYSNDRDKISAEKKINLSKCESDDDDEEQKALDELVKEHAEAKETHLLEKKIVDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHGLAYKLEQSELQDQLKMQYECSSSPSAMNDIEIHIKNLENQLKEQSEDFTNSLATIKALETHIRKLEEEMEKQTQGFEADLEAVTRDKVEQEQRAIQAEEAFRKIRLKNAKTAERLQEEFRKLSTQMTSTFDANEKATMKALTEASEVRAQKKVQEEELHKVKEELESTTAEYEVKLNQLSNQVDMMKGQIQQMLLEIEDKSKQLENQKKHEEQVSRDFSNEIGLLKAEIGKLNMEISCLLEQVEDKEILKTDLEIMKKSVEEFETLLQKGSVERNELLATNELLKREAEESLNELNRIIHQKDEKETEVRVLQSELEAVRAQYNDLKHSISKEEVEKEKLLKQVFQLKAELKKKDDALISSEKRFRESSARAQLNDGTKNILKNKKTASVPQNSKEIATLKEKIKTLEGLIQTKETTLETSTTSFLQKEKELQTKIEELENRVEEFNRSVALQKDRSFTTSNEISAELTSLKERNKSMESELKEMQERYLEMSLNFAEVEGERQKLVMAVRNLKSTQKG 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02466 1089 Coils Coil 597 645 - -
Vimu7g02466 1089 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1026 1088 - -
Vimu7g02466 1089 Coils Coil 714 791 - -
Vimu7g02466 1089 MobiDBLite consensus disorder prediction 188 216 - -
Vimu7g02466 1089 Coils Coil 506 526 - -
Vimu7g02466 1089 MobiDBLite consensus disorder prediction 235 255 - -
Vimu7g02466 1089 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 56 152 IPR019448 -
Vimu7g02466 1089 Coils Coil 967 987 - -
Vimu7g02466 1089 Coils Coil 429 473 - -
Vimu7g02466 1089 Coils Coil 650 670 - -
Vimu7g02466 1089 Coils Coil 533 567 - -
Vimu7g02466 1089 MobiDBLite consensus disorder prediction 235 268 - -
Vimu7g02466 1089 MobiDBLite consensus disorder prediction 188 219 - -
Vimu7g02466 1089 Coils Coil 343 370 - -
Vimu7g02466 1089 ProSiteProfiles C2 NT-type domain profile. 1 148 IPR019448 -
Vimu7g02466 1089 Coils Coil 992 1026 - -
Vimu7g02466 1089 MobiDBLite consensus disorder prediction 317 340 - -
Vimu7g02466 1089 Coils Coil 1031 1072 - -
Vimu7g02466 1089 Coils Coil 844 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02466 Vimu-Chr7 21079000 21083408 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02466 - - pvu:PHAVU_002G155900g 1660.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02466 7 21079000 21083408 Vimu11g04380 11 65043635 65048371 PCT