Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04380 ATGTTCAGATGGAGGAGTGAGAAACACAAAGTCAAAGCTGTTTTCAAACTCCACTTCCATGTCACCCAGATGGTGCAATCTGGGGTGGAATCTTTGGTGCTTTCTATAGTTCCAGGGGACATTGGAAAGGTAACTACGAGGTTAGAGAAAGCAGCAATTCGTGGTGGAGTTTGTAGATGGGAGAATCCTGTCTATGAAACAATCAAGCTTTTTCAGGAGCCAAAGACCGGGAAATTCAGTGAGAGAGTATATTATTTTGTGGTTTCAACGGGGTTATCAAAAGCTAGCTCCTTTGGGGAAGTCTCTGTAGACTTTTCTGAGTACGCCGAGGCTACGAAACCCTCCACTGTCTCTCTTCCCATCAAGAATTCTCATTGTGAAGCCGTCTTGCATGTGACAATCCAGAGGCTGCAAGAAAATAATGATAAAAGACAGCAAGAGGATTGTGAAGATACCGAACTAAAACCAAATGATAGAAGTTTGAGGACCTACTTGAGCAATGGAGAGATAGATGCAAGCTCGAAAAGTGATTCTTCTGAAGATGTGTCTGCCAAAGCAAATGGCAATGGAGCTGAATTGAGTGCTGATTGTAGGACATCCAGTGGATCTGACATTACAACGTTAAGTTCTGATGGAAGCTCTGGACTTGACACACCCAGAGAACTAGGAGTAATAAATGGTGGCATCCACTCCAACAACAATGGTTTTCTTTCAGATGTTAGCCACACATCTGATCCCCAGAAACCTGCTGTAAATGATATTCATCAGAGATCACACTGGGACTGGTCTGGTGGTTCAGAACACAGTTTGAGTACGGATGGGTCAACAAATGGTTCTCAGGATGCTCTTCCAAGGGAAAGATCCCCTCAAACATCTGATGTGGAAATTGGAAGACTCAAGGCTGAACTCGCTGCTTTGGCCAGGCAGGTGGATGTGTCAGACTTGGAACTGCAGACACTGAGGAAGCAAATTGTAAAGGAAAGCAAAAGAGGACAGGAGCTCTCAAAGGAAATCGTTTGCGTCAAAGAGGAAAGAGATGCACTCAAGATTGAATGTGACAATCTCAGATCTTTTCATAAACGAATGGAGGAGGCCAAACTGAGTAATAGGCCACCCTTGGATAGTGGGGATCTTTGTACTCTTGTTGAAGAAATTAAACAAGAATTGAAGTTTGAGAAGGAGCTGAACGCAAATCTTCAATTACAGCTAAAGAAGACACAAGAGTCTAACGCTGATCTAGTTCTTGCTGTGCAGGACCTGGATGAAATGCTGGAGCAGAAAAATAGGGAAATGTGTAGTCTTTCCAATAAGAACGAAGAGGGTAAAATCTCCCGTGAGTCAGAGGCAAAGCTCTCTAATTCTGAAACGGATGATGAACAGAAAGAATTGGAAGAGCTAGTTAAGGAGCACAGCAATGCTCAGGAGACTCACCTACTTGAACAAAAGATTATAGATCTCTATGGTGAAATAGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAACAGCTTGCACTAGACTATGAGATATTGAAACAGGAAAACCATGATATTGCATATAAGCTGGAACAGAGTGAACTGCAAGAACAATTAAAATTACAGTATGAGTGCTCTTCTCCTCCTGCTGTCGATGAAATTGATGCCCATATTCAGAATCTGGAAAATCAACTCAAGCAACAGTCAGAAGAACTCTCAAATTCTCTGGCTACCATCAAGGATCTTGGAACCCAAATCAGCAGATTAGAGGAAGAACTGGAGAAACAAGCCCAAGGATTTGAAGCTGATCTAGATGCCGTGACACGTGCCAAAGTTGAGCAGGAGCAAAGAGCCATTCAAGCAGAAGAAGCTTTGCGAAGCACTAGACATAAAAATGCTAACACTGCTGAGAGGCTTCAGGAAGAATTTAGAAGGCTCTCAATGCAAATGGCCTCTACATTTGATGCCAACGAGAAGGCTGCCATGAGGGCATTGACAGAAGCAAGTGAACTTCGTGCACAGAAAAGACTGGTGGAAGCAATGCTGCACAAAGTCAATGCCGAGCTTCAGTCAGCCAAAACTGATTATGAGGTAAAACTGGATGAACTTTCCAACAAAATAGACATGATGGCTGCTCAGAAACAACAGATGTTGTTGGAAATTGACGACAAGACCAAGCAGCTCGAAAATCAAAAGAAGCGTGAGGAACAAGTTAGTAGGGATTTCTATGAAGAGATCCAGATGCTAAAAGGTGAAAATGGAAGGCTTAAAGTGGAGATTTCATGCCTCTCTGAGAAAGCAGAAAAAAAAGATATCTTAAGAAATGACTTGGAACTCATGAAGAAATCGCTTGAGGAATCTGAGGCTCGGTTAAATAGTAGAACGGTGGAAAGAAATGAGCTAGTGAGTGAAATTGATCTGTTGAAAAAGGAAGCAGAAAAGTCACTTGATGAGCTAAATAGGATGAAGCATCTCAATGATGAAAAAGAGATTGAGACTAGAGTTTTGCAGTCAGAGTTAGAAGAACTCAGAGCTCAATACAGTGACTTGAAAAGGGCCTGTTTTGAGGACGAAGCTGAGAAAGAAAATCTAAGAAAGCATGTATTCCAGCTAAAGGGTGAACTTAAGAAGAAGGACGACGCATTAACCAACATGGAGAAGAGGTTCAAGGATAGCAATGGACGCACACAACTTTCAGATGGAACTAAACCCAATTTAAAGAACAAAAAAGGTGCTTCAATTCCTCAGAGTGCAAAAGAAATAGCAAATCTGAGGGAGAAAATAAAAACACTTGAGGGCATGATAAAGTCCAAGGAAACTGCTTTGGAAAGGTCAGCTTCTTCATTTTTGGAGAAGGAAAGGGAGCTCCAATCCAAAATCGAGGAACTGGAAGACAAAGTGGAGGAATTCAATCAGAGCATTGCTTTGCAAAAGGTTGATGAGGATAAGGGTATTACTACTTCAAATGATACTACAAGCGTGCCTGAGGAAAATGGTGTTGCATTGACATTGTTGAAGAGTAATGTATATTTGTCGGGGAAAGAAGCAGAAAGATCCACAATGGATGATAATGGAGATGGCAATCTTTGTGAAACTTTAGCTGAATTATCGCTGTTGAAGGAAAGAAACAACTTAATGGAAACTGAGCTAAAAGAGTTACAACAAAGATACTCAGAAATGAGTCTCAAATTTGCAGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACAGTAAGAAACCTCAAGAATGCTCGGAAGGCTCAATGA 3252 0.4157 MFRWRSEKHKVKAVFKLHFHVTQMVQSGVESLVLSIVPGDIGKVTTRLEKAAIRGGVCRWENPVYETIKLFQEPKTGKFSERVYYFVVSTGLSKASSFGEVSVDFSEYAEATKPSTVSLPIKNSHCEAVLHVTIQRLQENNDKRQQEDCEDTELKPNDRSLRTYLSNGEIDASSKSDSSEDVSAKANGNGAELSADCRTSSGSDITTLSSDGSSGLDTPRELGVINGGIHSNNNGFLSDVSHTSDPQKPAVNDIHQRSHWDWSGGSEHSLSTDGSTNGSQDALPRERSPQTSDVEIGRLKAELAALARQVDVSDLELQTLRKQIVKESKRGQELSKEIVCVKEERDALKIECDNLRSFHKRMEEAKLSNRPPLDSGDLCTLVEEIKQELKFEKELNANLQLQLKKTQESNADLVLAVQDLDEMLEQKNREMCSLSNKNEEGKISRESEAKLSNSETDDEQKELEELVKEHSNAQETHLLEQKIIDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSELQEQLKLQYECSSPPAVDEIDAHIQNLENQLKQQSEELSNSLATIKDLGTQISRLEEELEKQAQGFEADLDAVTRAKVEQEQRAIQAEEALRSTRHKNANTAERLQEEFRRLSMQMASTFDANEKAAMRALTEASELRAQKRLVEAMLHKVNAELQSAKTDYEVKLDELSNKIDMMAAQKQQMLLEIDDKTKQLENQKKREEQVSRDFYEEIQMLKGENGRLKVEISCLSEKAEKKDILRNDLELMKKSLEESEARLNSRTVERNELVSEIDLLKKEAEKSLDELNRMKHLNDEKEIETRVLQSELEELRAQYSDLKRACFEDEAEKENLRKHVFQLKGELKKKDDALTNMEKRFKDSNGRTQLSDGTKPNLKNKKGASIPQSAKEIANLREKIKTLEGMIKSKETALERSASSFLEKERELQSKIEELEDKVEEFNQSIALQKVDEDKGITTSNDTTSVPEENGVALTLLKSNVYLSGKEAERSTMDDNGDGNLCETLAELSLLKERNNLMETELKELQQRYSEMSLKFAEVEGERQKLVMTVRNLKNARKAQ 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04380 1083 Coils Coil 793 855 - -
Vimu11g04380 1083 MobiDBLite consensus disorder prediction 263 287 - -
Vimu11g04380 1083 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1081 - -
Vimu11g04380 1083 Coils Coil 941 975 - -
Vimu11g04380 1083 MobiDBLite consensus disorder prediction 432 459 - -
Vimu11g04380 1083 Coils Coil 303 351 - -
Vimu11g04380 1083 MobiDBLite consensus disorder prediction 193 216 - -
Vimu11g04380 1083 Coils Coil 546 626 - -
Vimu11g04380 1083 MobiDBLite consensus disorder prediction 890 907 - -
Vimu11g04380 1083 Coils Coil 449 476 - -
Vimu11g04380 1083 Coils Coil 663 736 - -
Vimu11g04380 1083 Coils Coil 1031 1065 - -
Vimu11g04380 1083 MobiDBLite consensus disorder prediction 882 912 - -
Vimu11g04380 1083 Coils Coil 382 430 - -
Vimu11g04380 1083 Coils Coil 765 789 - -
Vimu11g04380 1083 Coils Coil 916 936 - -
Vimu11g04380 1083 MobiDBLite consensus disorder prediction 258 293 - -
Vimu11g04380 1083 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Vimu11g04380 1083 Coils Coil 483 517 - -
Vimu11g04380 1083 MobiDBLite consensus disorder prediction 139 158 - -
Vimu11g04380 1083 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 8 143 IPR019448 -
Vimu11g04380 1083 MobiDBLite consensus disorder prediction 139 229 - -
Vimu11g04380 1083 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04380 Vimu-Chr11 65043635 65048371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04380 - - gmx:100819574 1759.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04380 11 65043635 65048371 Vimu11g04380 11 65043635 65048371 ECH
Vimu7g02466 7 21079000 21083408 Vimu11g04380 11 65043635 65048371 PCT