Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02465 ATGGCGAAGGTTTACCCTGATCAGGAGGAACCCACTTTCTCTTCCTGCCCCTCCTATGGACCACACACATATACCCTCTGGATGAAATCACTCGTTTGCAACTCTAACGGTTGCACCGTCTACGATTCTAACGGTCTCATCGTTTATCGCGTTGATAACTACGACACAAAGGGTAGAAGAGACGTTAACCTTTTGGATCTCCGAGGAAGAGTTCTTTGCACCATACACAAGAGAGTGCTTGGTTTTGGACGTTGGGATGTGTACAGAAGTAGCTGTGACAGTAGTAACAGTGAAAACCAGGAAAAGCCTTGGTTTCAAGTTAAAAGATGCCATGAGATGATGACCGGAAAAGTGACGTGCCAGATTAGTACGGTGGAGTGTCAGAAGTACTGCATAGAGAAAATCGGTGCCAAAACAGCGTTTCGGATTGTCAACACAGATGATGGAGACATTGTTGCCCATGCGAAGCAAAAGCATTCGACCTCCGGAGTTATACTGGGCAGTGATGTTCTAACGTTGGATGTTGAAGGTGGAATTGATCATTCTCTAGTAATGGCTTTTGTCACAGTGTTTGGATTAATCTGCGGCAGAATGTGA 597 0.4539 MAKVYPDQEEPTFSSCPSYGPHTYTLWMKSLVCNSNGCTVYDSNGLIVYRVDNYDTKGRRDVNLLDLRGRVLCTIHKRVLGFGRWDVYRSSCDSSNSENQEKPWFQVKRCHEMMTGKVTCQISTVECQKYCIEKIGAKTAFRIVNTDDGDIVAHAKQKHSTSGVILGSDVLTLDVEGGIDHSLVMAFVTVFGLICGRM 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02465 198 PANTHER - 22 195 IPR007612 -
Vimu7g02465 198 Gene3D - 16 197 IPR038595 -
Vimu7g02465 198 Pfam LURP-one-related 21 190 IPR007612 -
Vimu7g02465 198 SUPERFAMILY Tubby C-terminal domain-like 19 195 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02465 Vimu-Chr7 21072946 21073680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02465 - - gmx:100815833 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02465 7 21072946 21073680 Vimu11g04388 11 65097994 65098834 PCT