Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02455 ATGGCTAGCCAATCAAACACTAAATCATCAGTTCATGATTTCACAGTTAAAGATGCCAGGGGAAATGATGTTAATCTGGGGGATTACAAAGGAAAAGTTCTTCTCATTGTCAATGTTGCCTCACAATGTGGCTTGACTAACTCAAACTACACAGAGCTGAATCAAGTGTATGATAAATACAAAGGGAAAGGACTTGAAATTCTGGCATTCCCTTGCAATCAGTTTGGGGCTCAGGAACCAGGAACTAATGAAGAGATAGTGGAATTTGCTTGTACTCGCTTCAAAGCTGAGTTTTCCATTTTTGACAAGGTGGATGTGAATGGTGACAATGCTGCTCCACTGTACAAATTTCTGAAATCAAGCAAAGGTGAAGTCTTAGGGGATAGTATCAAATGGAACTTCTCTAAATTTCTTGTTGACAAGGATGGGATTGTAGTTGACCGCTATGCACCAACAACTTCTCCTCTAAGCATTGAGAAAGACATAAAGAAGCTGTTGGATGCATGA 507 0.3984 MASQSNTKSSVHDFTVKDARGNDVNLGDYKGKVLLIVNVASQCGLTNSNYTELNQVYDKYKGKGLEILAFPCNQFGAQEPGTNEEIVEFACTRFKAEFSIFDKVDVNGDNAAPLYKFLKSSKGEVLGDSIKWNFSKFLVDKDGIVVDRYAPTTSPLSIEKDIKKLLDA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02455 168 ProSiteProfiles Thioredoxin domain profile. 5 168 IPR013766 -
Vimu7g02455 168 ProSitePatterns Glutathione peroxidases active site. 31 46 IPR029759 -
Vimu7g02455 168 CDD GSH_Peroxidase 10 162 IPR000889 GO:0004602|GO:0006979
Vimu7g02455 168 ProSiteProfiles Glutathione peroxidase profile. 1 168 IPR000889 GO:0004602|GO:0006979
Vimu7g02455 168 Gene3D Glutaredoxin 1 168 - -
Vimu7g02455 168 PANTHER GLUTATHIONE PEROXIDASE 4 166 IPR000889 GO:0004602|GO:0006979
Vimu7g02455 168 SUPERFAMILY Thioredoxin-like 10 167 IPR036249 -
Vimu7g02455 168 PIRSF Glutathion_perox 1 168 IPR000889 GO:0004602|GO:0006979
Vimu7g02455 168 PRINTS Glutathione peroxidase family signature 65 81 IPR000889 GO:0004602|GO:0006979
Vimu7g02455 168 PRINTS Glutathione peroxidase family signature 29 46 IPR000889 GO:0004602|GO:0006979
Vimu7g02455 168 PRINTS Glutathione peroxidase family signature 130 139 IPR000889 GO:0004602|GO:0006979
Vimu7g02455 168 ProSitePatterns Glutathione peroxidases signature 2. 68 75 IPR029760 -
Vimu7g02455 168 FunFam Glutathione peroxidase 2 168 - -
Vimu7g02455 168 Pfam Glutathione peroxidase 11 119 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02455 Vimu-Chr7 21019717 21021061 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02455 K00432 - gmx:100500036 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02455 7 21019717 21021061 Vimu11g04402 11 65160515 65162827 PCT