Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04402 ATGGTGGCACTGACGTTGTCCCCGGTCACGATGAGCAACGGCTGTGCACTCCGACTCCGATTGGTGTCGTCGTCGAAAGCTCATTCCGGCAAGATGGGGGGCGGCGGTGAGGCACTGGATTCCGATGGTGGTGGCTTGCGCGTGGAGAAGGAGAATGGGGAAGAAAAGTTCCTTCTGTTGCCTTCTCTTTGCGACCTTCACCACACCATGGCCACTCAACCCACCAACCATCCAAACTCAGTATACGATTTTACTGTCAAGGATACTAAAGGTGATGATGTTGATCTTGTCACTTACAAGGGAAAGGTATTGGTCATTGTTAATGTTGCTTCCAAATGTGGCATGACCAACTCAAATTATGTGGAGTTGAATCAACTATATGAGAAGTACAAAGACAAAGGGCTGGAGATTCTGGCATTTCCATGTAATCAATTTGGGGAGGAAGAACCTGGAAGCAATGATCAAATTAAGGAGTTTGTCTGCACTCGCTTTAAATCTGAATTTCCCATCTTTGATAAGGTACATGAACATACTAGCTTGGAAAGCTTGCATTTAATCACCAAGTTTGAGCCCTCTCAAATTGAAGTGAATGGGGACAATTCTGCTCCTTTATATAAATTCTTGAAGTCAGGTAAGTGGGGAATATTTGGGGATGATATTCAGTGGAACTTTGCCAAGTTTCTAGTTGACAAGGATGGGCAAGTGGTAGATCGCTATTATCCCACCACATCTCCTCTTAGCCTTGAGGATTCAGCTGGGAGGAGAGGGTGTGATGAACGTCAAAGGATCTAG 792 0.4545 MVALTLSPVTMSNGCALRLRLVSSSKAHSGKMGGGGEALDSDGGGLRVEKENGEEKFLLLPSLCDLHHTMATQPTNHPNSVYDFTVKDTKGDDVDLVTYKGKVLVIVNVASKCGMTNSNYVELNQLYEKYKDKGLEILAFPCNQFGEEEPGSNDQIKEFVCTRFKSEFPIFDKVHEHTSLESLHLITKFEPSQIEVNGDNSAPLYKFLKSGKWGIFGDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLEDSAGRRGCDERQRI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04402 263 ProSitePatterns Glutathione peroxidases signature 2. 138 145 IPR029760 -
Vimu11g04402 263 ProSitePatterns Glutathione peroxidases active site. 101 116 IPR029759 -
Vimu11g04402 263 ProSiteProfiles Glutathione peroxidase profile. 71 263 IPR000889 GO:0004602|GO:0006979
Vimu11g04402 263 Pfam Glutathione peroxidase 81 175 IPR000889 GO:0004602|GO:0006979
Vimu11g04402 263 Gene3D Glutaredoxin 70 253 - -
Vimu11g04402 263 SUPERFAMILY Thioredoxin-like 80 250 IPR036249 -
Vimu11g04402 263 PRINTS Glutathione peroxidase family signature 220 229 IPR000889 GO:0004602|GO:0006979
Vimu11g04402 263 PRINTS Glutathione peroxidase family signature 135 151 IPR000889 GO:0004602|GO:0006979
Vimu11g04402 263 PRINTS Glutathione peroxidase family signature 99 116 IPR000889 GO:0004602|GO:0006979
Vimu11g04402 263 ProSiteProfiles Thioredoxin domain profile. 75 262 IPR013766 -
Vimu11g04402 263 CDD GSH_Peroxidase 80 250 IPR000889 GO:0004602|GO:0006979
Vimu11g04402 263 PANTHER GLUTATHIONE PEROXIDASE 74 250 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04402 Vimu-Chr11 65160515 65162827 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04402 K00432 - gmx:100808523 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04402 11 65160515 65162827 Vimu11g04402 11 65160515 65162827 ECH
Vimu7g02455 7 21019717 21021061 Vimu11g04402 11 65160515 65162827 PCT