Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02450 ATGGGTTCCCTCAATCTGAAATGGGCTTCAGGGTGCTTGGCTTTGTGGAAGGTAGATTCAAGTAAAGCTACTCTGAGAGGTAGTTATGGGAATGATCAGTTCAAGCGTAAAGAGAAAGGAGGAGCAAGATGCAAAGGAGGTCAAAGATCTGTGATTGTTGCTACGGGACCAGCCATAGACCACGCTCCTGCTATTTCCCGAGAGCCCTTGACAAAAGATCATCTTATTCACTACATGGCATCTGGTTGCAAGCCCAAACAAAACTGGAGAATAGGTACAGAGCACGAGAAGTTTGGTTTTGAGCGTAAAACTTTACGTTCTATTAATTACGAACAATTATCAGATTTACTCAATGGCATTGCTGAGAGATTTGATTGGGAAAAAATAATGGAAGGTGAAAACATCATAGGACTAAAAAATGACAAGCAAAACATATCATTAGAGGGTGGAGGTCAGCTTGAGCTCAGTGGTGCGCCTTTGAAAACATTGCATCAAACTTGTGATGAGATTAATTCACATCTCTATCAGGCTAAAACTGTAGCAGATGAAATGGGAATTGATTTTATGGGATTAGGTTATCAGCCTAAATGGAGATTGGAAGATATAGTTAGAGTGCCTAAGGAACGGTATAACATTTTACAGAACCAGTTATGCAAATTTGGTTCGCCTGGAGTTGAAATATTGATCATGGCATGCTCAGTTCAGGTCAACCTGGACTTCAGTTCGGAAGCAGACATGATCAAGAAAATGCGTGCCGGAATTGCTTTGCAGCCATTAGCAGCAGCCTTATTTGCAAATTCACCTTTCAAGGAAGGGGTTCCAAGTTCTTATCTCACCACAAGAGGCCACATTGGTGACTTTGACAAACATCGCACTGGGATACTCCCCTTTGTTTTTTATGACAATTTTGGGTTTGAGCAGTACGTTGATTACGCTCTTGATGTGCCGATGGTGTTTGTTTATCGAGAAAATAAGTACATTGACTGTCGTGATATGTCATTCCGGGACTTCATCGCAGGTAAACTCCCTGCCATTCCAGGTGAAGTGCCAACACTAGCTGACTGGGAAAATCATCTGACAACCATATTCCCTGAGGTCAGGCTAAAGAGATACATGGAAATGAGAGGTGCTGATAATGGCCCTCTTGACATGATATGCGCTGTCCCTGCTTTTTGGGTAGGCTTACTGTATGATGAGGTTTCACTACAAAATGCTGTAGATATGATTGCCGATTGGACCCCTGAAGACATACAGAATTTAAGGGACATGGCTCCCATAACTGGATTAAGGACTCAAGTTCGAGGTAGATTGCTGAGACATATTGCAGAAGATGTGTTGAAGTGGGCAAAGGAAGGGTTGGACAGAAGATGCTTGAGTGAATCCGTTTTCTTGGATCCATTGAAGGAAGTGGTTGAGACAGGTTTGACACAAGCAGACAAACTGTTGGAGTTGTATCATAACAAGTGGGAAAACAACATAGATCATGTGTTCAGAGAGTGCTGCTACTAA 1509 0.4241 MGSLNLKWASGCLALWKVDSSKATLRGSYGNDQFKRKEKGGARCKGGQRSVIVATGPAIDHAPAISREPLTKDHLIHYMASGCKPKQNWRIGTEHEKFGFERKTLRSINYEQLSDLLNGIAERFDWEKIMEGENIIGLKNDKQNISLEGGGQLELSGAPLKTLHQTCDEINSHLYQAKTVADEMGIDFMGLGYQPKWRLEDIVRVPKERYNILQNQLCKFGSPGVEILIMACSVQVNLDFSSEADMIKKMRAGIALQPLAAALFANSPFKEGVPSSYLTTRGHIGDFDKHRTGILPFVFYDNFGFEQYVDYALDVPMVFVYRENKYIDCRDMSFRDFIAGKLPAIPGEVPTLADWENHLTTIFPEVRLKRYMEMRGADNGPLDMICAVPAFWVGLLYDEVSLQNAVDMIADWTPEDIQNLRDMAPITGLRTQVRGRLLRHIAEDVLKWAKEGLDRRCLSESVFLDPLKEVVETGLTQADKLLELYHNKWENNIDHVFRECCY 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02450 502 Pfam Glutamate-cysteine ligase family 2(GCS2) 117 412 IPR006336 GO:0004357|GO:0042398
Vimu7g02450 502 NCBIfam glutamate--cysteine ligase 69 502 IPR011556 GO:0004357|GO:0006750
Vimu7g02450 502 PIRSF GCL 57 502 IPR035434 GO:0004357|GO:0006750
Vimu7g02450 502 Gene3D - 55 502 - -
Vimu7g02450 502 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 47 502 IPR035434 GO:0004357|GO:0006750
Vimu7g02450 502 SUPERFAMILY Glutamine synthetase/guanido kinase 81 495 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02450 Vimu-Chr7 20970547 20974043 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02450 K01919 - gmx:100775188 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02450 7 20970547 20974043 Vimu11g04406 11 65187628 65196207 PCT