Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02446 ATGGTGAATCGTCGACGCCTGACTCGGGTGGCGACGAGCGATGACGAAGACGAAGCACCACGCCCACAGCCAACGCGCAAGAGGATGAGGCTTCTCGAGGAAGATAACGATGACGAGAATGAAGAGGAAGAAAAGGAAGAGGTACCGGAACCGCCTCAACCCTTGGAGGACGCTAAGCCTATTGGCGAGCCTGTTAGGGTTTCAGGAAAAGGAAGAGGCAGGAAAAGGCACTATGACTCCTTCGAGTTCGATGGCATGCAATATACTCTCGAGGATCCTGTTCTTCTTGTACCCGAGGACAAAGGCCAAAAGCCATATGTTGCAATTATTAAGGACATTACACAGTCTATCAGTGGCAACGTGAAAGTAACGGGACAATGGTTTTATCGCCCAGAAGAAGCTGAGAAAAAAGGTGGTGGAAACTGGCAATCGTGTGATACGAGGGAGCTATTTTATAGTTTTCATCGTGATGATGTTCCTGCGGAGTCTGTAATGCATAAGTGTGTGGTGCATTTTGTTCCCAGACACAAACAGCTTCCAAAACGTAAGGATCACCCTGGTTTTATTGTACAGAAGGTGTATGACACTGTGGAAAGAAAACTCTGGAGGCTGAGTGATAAGGATTATGAGGATATTAAGCAGCAAGAAATTGACGTGCTTGTTCAAAAGACTCTGGAACGTGTTGGTGAACTTCTTGACATTGAGCCTAAGGAGGAACCCCCTGATTATGTCGAGGACCAGATAAAACATAGAAGAAGCTTGAACAGAAAAAGTGTTTCACCTCCCAATGCTTCAAAGGAAGAGGAGGAAACACCCAGGAGTGAACAACATCCAAAATCAGAAACACCAGTGAATTGTGTAACAAATAATGCCTCAGAGTATTATGGCATATTGGTAGAATTCAACGCGCTAACTGGAGATAGCCATCGTGACAAATGGTTGGAGAGGTTGCTTCAACGCATTCAGTACATGTGTGATTGTAATGATAGCAAAGAAAGGGACAAAGGATTGGGAAGTGGCAATTCTGATGAAATCAACGGTGGAAGCAAGAATATAAGTTCAGAATCACTAAATGACTGTCAAGATAAGTTTCAGAAGAATTCCAAGTCTTTTATCTGGCCAGATGCTGCTGTTTCAGCCATAGTTTCTCTCGAAAAGGCTTCACATGACGCTCTCTCATCAGATTTTATGAAGTACAACCAAAAGTTGCGGCAATTAGCTTTTAATCTGCAGATCCTTCCATGGAGGAAAGGGAGAGGTGAAAATTTGGGTCAGCTGGTTAAGATGGCCAAGGAGGAGAAAAGAGCATGTATTCAGCTTGAGACTACTCGTATAGGAACTTTAGTCCTCATTTTAGTGCTTGTTTTGTTTGGAATTGCTTTATGCGAATCAAGTCTTGCTAAGGCAAAGACAAAGGGGTGTGAGGGTTTGGTTGCTGACAAAAAAATCAAGGAGAAACCTGAGGAGACCCAACATTTGCAAATGACAGATGGCCGCTGCTCAAAATGCATGGAATGTAAGGTGGGCTTGAGAGAGATTATCCATGCTGGAAATAATGAACGATATCAGTTGGAATGCGTTTCCTGCGGTCATTCCTGGTATGCCTCTAGAGATGAGGTGTCTATGCCTATAATAGATTCTTCTGATTCAAAAAGAAACATAGGCACAGCGCCGTAG 1677 0.4395 MVNRRRLTRVATSDDEDEAPRPQPTRKRMRLLEEDNDDENEEEEKEEVPEPPQPLEDAKPIGEPVRVSGKGRGRKRHYDSFEFDGMQYTLEDPVLLVPEDKGQKPYVAIIKDITQSISGNVKVTGQWFYRPEEAEKKGGGNWQSCDTRELFYSFHRDDVPAESVMHKCVVHFVPRHKQLPKRKDHPGFIVQKVYDTVERKLWRLSDKDYEDIKQQEIDVLVQKTLERVGELLDIEPKEEPPDYVEDQIKHRRSLNRKSVSPPNASKEEEETPRSEQHPKSETPVNCVTNNASEYYGILVEFNALTGDSHRDKWLERLLQRIQYMCDCNDSKERDKGLGSGNSDEINGGSKNISSESLNDCQDKFQKNSKSFIWPDAAVSAIVSLEKASHDALSSDFMKYNQKLRQLAFNLQILPWRKGRGENLGQLVKMAKEEKRACIQLETTRIGTLVLILVLVLFGIALCESSLAKAKTKGCEGLVADKKIKEKPEETQHLQMTDGRCSKCMECKVGLREIIHAGNNERYQLECVSCGHSWYASRDEVSMPIIDSSDSKRNIGTAP 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02446 558 MobiDBLite consensus disorder prediction 35 50 - -
Vimu7g02446 558 MobiDBLite consensus disorder prediction 1 74 - -
Vimu7g02446 558 Pfam BAH domain 87 201 IPR001025 GO:0003682
Vimu7g02446 558 MobiDBLite consensus disorder prediction 332 356 - -
Vimu7g02446 558 MobiDBLite consensus disorder prediction 236 286 - -
Vimu7g02446 558 CDD BAH_plant_3 68 214 - -
Vimu7g02446 558 ProSiteProfiles BAH domain profile. 86 205 IPR001025 GO:0003682
Vimu7g02446 558 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 558 - -
Vimu7g02446 558 MobiDBLite consensus disorder prediction 262 277 - -
Vimu7g02446 558 Gene3D - 68 297 IPR043151 -
Vimu7g02446 558 SMART BAH_4 86 205 IPR001025 GO:0003682
Vimu7g02446 558 MobiDBLite consensus disorder prediction 342 356 - -
Vimu7g02446 558 MobiDBLite consensus disorder prediction 8 34 - -
Vimu7g02446 558 MobiDBLite consensus disorder prediction 236 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02446 Vimu-Chr7 20936321 20942149 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02446 - - gmx:100776280 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02446 7 20936321 20942149 Vimu11g04408 11 65214616 65223515 PCT