Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02421 ATGAGGGTGTTTCCTAGACTCAGATCCCTCTCGAGAGCAGTTCATCAGGAACAGGAACAGGAACAAGAGCATGACGAGGAGAAAAACAACGTAGAACAGTTGAGCACGTCCCTGACAGTTTGGAGAAAATCCTTGGTGATGAGTTGCAAAGGATTCACTGTCATCGATTGTTGTGGGAATTTGGTGTATCGGGTCGACAATTATATTGGTCGACCCAACGAAGTCACTCTCATGGATGCCTCGGGAAAATCTATTCTGACCATGTTCCGCCGCAGGAGGCTTGGATTGTTGGAAGAATGGTTTGTGTATGAAGGAGAAGTGGGAAACATTAGAAGGAGAAGTAAATTGTCTAAGCCATCAAAGAGTCCAATTTGTTGTGTAAGGAGGCATGTCAATATTTTACATGGAAACTCCAATGTTCTGGCCTACGTGTTCCGTGGAGTCTCACATTCAGATAAACGGTGTGTGGCGTTTACTGTAGAGGGTTCCTACGCAAATCGTACGTGTAAGGTGTTGGATGAGTGTAGAAGGGTCGTGGCTGAAATAAAGAGGAAGGAAGCTAACACCAAAAACGTCTCTTTTGGGATAGAGATTTTTCAGTTGGTTGTGCATTCTGGCATTGATCCAGCCTTTGCCATGGCACTCGTCTTACTCCTCGATCAAATGTTTTCGTGA 675 0.4489 MRVFPRLRSLSRAVHQEQEQEQEHDEEKNNVEQLSTSLTVWRKSLVMSCKGFTVIDCCGNLVYRVDNYIGRPNEVTLMDASGKSILTMFRRRRLGLLEEWFVYEGEVGNIRRRSKLSKPSKSPICCVRRHVNILHGNSNVLAYVFRGVSHSDKRCVAFTVEGSYANRTCKVLDECRRVVAEIKRKEANTKNVSFGIEIFQLVVHSGIDPAFAMALVLLLDQMFS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02421 224 Pfam LURP-one-related 28 217 IPR007612 -
Vimu7g02421 224 Coils Coil 7 37 - -
Vimu7g02421 224 Gene3D - 28 224 IPR038595 -
Vimu7g02421 224 SUPERFAMILY Tubby C-terminal domain-like 33 223 IPR025659 -
Vimu7g02421 224 PANTHER - 36 223 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02421 Vimu-Chr7 20738763 20739532 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02421 - - gmx:100804978 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02421 7 20738763 20739532 Vimu7g02421 7 20738763 20739532 ECH
Vimu7g02421 7 20738763 20739532 Vimu11g04457 11 65661438 65662526 PCT