Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04457 ATGAGGGTGTTTCCCAGGTTCAAGTTTCTGTCACGAGCAGTGCACGAGGAACACGAGGGTGAGCATGATGGGGAGAGAAACAGGTACCCTTTAACGGAAGGAAGCTTGTGCACCTCCTTAACACTAACAGTTTGGAAAAAATCCCTAGTGATTAGTTGTAAAGGGTTCACCGTGATTGATTCGTATGGAAACCTGGCTTATAGGGTTGACAATTACACCGGGCACCCCAATGAAGTCATTCTCATGGACGCTTCAGGAAACTCTGTCCTCACTCTGCGCCGCTCCAGGAAGCTGGGATTAGTAGATAGCTGGTTTGTGTATGAAGGGGAAAGAGGGAAGCAGAGTACGAGAAATAAGTGGTGTAAATCGAATAACAGTCCAGTTTGTTGTGTAAGGAAGCGTGTGAATATTTTAGACGGCAAGCCCAAGGTTCAGGCCTACGTGTATCGTGTAGCATCGGACTCAGATAAACGACATGCGGCATTTACAGTTGAAGGTTCCTATGCACATAGGACATGTAAAGTGTTAGATGAGTGCAAGAAGGCTGTGGCTGAAATCAAGAGAAAGGAGGCCAATAGCAAAGACGTCTCTTTCGGGATAGAGATTTTTCAATTGGTTGTTCACCCTGGCTTTGATCCTAGCTTTGCCATGGCAATCGTTTTACTGCTGGATCAAATGTTTTCGTAA 687 0.4571 MRVFPRFKFLSRAVHEEHEGEHDGERNRYPLTEGSLCTSLTLTVWKKSLVISCKGFTVIDSYGNLAYRVDNYTGHPNEVILMDASGNSVLTLRRSRKLGLVDSWFVYEGERGKQSTRNKWCKSNNSPVCCVRKRVNILDGKPKVQAYVYRVASDSDKRHAAFTVEGSYAHRTCKVLDECKKAVAEIKRKEANSKDVSFGIEIFQLVVHPGFDPSFAMAIVLLLDQMFS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04457 228 SUPERFAMILY Tubby C-terminal domain-like 40 227 IPR025659 -
Vimu11g04457 228 Pfam LURP-one-related 40 221 IPR007612 -
Vimu11g04457 228 PANTHER - 41 227 IPR007612 -
Vimu11g04457 228 Gene3D - 37 228 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04457 Vimu-Chr11 65661438 65662526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04457 - - gmx:100782098 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02421 7 20738763 20739532 Vimu11g04457 11 65661438 65662526 PCT