Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02420 ATGGTTGCCTGCGGTAGTCGTGGTTTCTCTGGTTTTTGCAGATTCAGGTGGTGCTCTAGCGAGATATGTTGTGAATGTGTTAATGGTTCTGGTGGTTGGACAATTTTTGTGGTGGTAGGCTTCCATGGAGGACAAAGGAGTTCGTTGATGATGTACTTTGGGTGGCTCGAGAAAGTCATCATGGACGGTGCTCCAAAGCACGAACGCCGCTGGGCGTCTGATACGGTGCCGGATGTTGCATTCGTCAGCGGAGGGACGTCGCCGGGAACCGAGTCATACTCCGTCGCCGACGAGTACGTCGAGGTCACGCTCGACGTTCAAGACGATCACACCATCGTTCTCCGCGGCGTTGAGTCGGTGACTGTCGTTAACGTCGACGAAGGCTTTGCTGCAAGCGGAAATGAAACTCCGGTGTCTTCCGCCTGGTCGCCGTCGATCAGGAGGAGCTCTCCCAGCCGGTGGCGGCAGTTCTCTCAGGAGCTTAAGACCGAGGCGGTTGCGAAGGCGAGGCAGTTCTCGCAGGAGCTCAAGGCGGAACTGCGGCGGTTTTCGTGGAGCCAGGGAGGATCTGAAACGGCGTTCTTGCCGCGAGATCTTAGGAAGCAGCGCGCTCAGCTTGAGCGCAACAGCTCCGGAACGAAGAAAGCGCTCCGTGGACTGAAATTCATTAGCAGTAAATCCAACGGCGCTGATGCCTGGAATGAGGTGCAAAGCAATTTCGATAGTCTTGCTAAAGACGGTTTTCTCTACCGCACCGATTTTGCGCAATGCATAGGAATGAAGGACTCTAAGGAGTTCGCACTGGAACTGTTCGATGCTCTGGGTCGTAGACGAAGACTCAGGGTTGAAAAGATCAGCAGAGACGAACTTACCGAATTCTGGTCGCAAATTACCGATCAAAGCTTTGATTCACGTCTCCAGATCTTCTTTGATATGGTGGACAAGAACGAAGATGGTAGAATAACCGAAGAAGAAGTGAAAGAGATCATTATGCTAAGCGCTTCAGCAAATAAGTTATCCAGATTGAAAGAGCAAGCCGAAGAATACGCAGCTCTGATCATGGAAGAGTTAGACCCTGAACGACTCGGCTACATTGAGCTATGGCAATTGGAGACGCTTCTGTTACAAAAGGATACGTATCTGAACTACAGCCAAGCACTAAGCTACACCAGTCAAGCTTTGAGTCAGAACCTACAAGGAAGAAGGGCAAGAAGCCCGATACGTAGGATTAGCCGCAGGATGATCTACTATTTGCAAGAAAATTGGAAGAGGCTTTGGGTTTTAGCATTGTGGGTTTCGGTGATGATTGGGCTGTTTACGTGGAAGTTCATCGAGTACAAGCGAAAAAATGCTTATCATGTCATGGGTTACTGTCTCCTCGCGGCCAAAGGTGCTGCTGAAACACTCAAGTTCAACATGGCACTTATACTCTTTCCCGTCTGCAGAAATACCATAACGTGGCTCAGGTCCACCAAGTTGGCTTATATTGCACCTTTCGATGATAACATTAACTTTCATAAGACAATTGCTGCTGCAGTAGTGATTGGAGTGATACTTCATGCAGGGAATCACCTTGCTTGTGATTTTCCGAGACTTGTAAATTCGTCTGAAAAAATGTATGAGAAGTATTTGGACGGCGTATTTGGTGATCACAAACCCAGTTACGGAGACCTCATTAAGGGGGTTGAGGGCATGACTGGAATTCTCATGGTGATTTTGATGGCAATAGCATTTACTCTTGCAACAAAATGGTTCAGAAGAAATCTTATTAAGCTTCCTAAACCGCTTAATAGGCTCACTGGTTTCAATGCATTCTGGTATTCACACCATCTATTTGTCATTGTCTATGTCCTGCTCATCATTCATGGTGTAAATCTTTACCTCGAGCGCAAATGGCACCTCCAGACGACATGGATGTATCTTGCAGTTCCAATCGTCCTTTATGTGGGAGAAAGAACGCTAAGATACTTCCGTTCTGGTTTCTATACAGTCCGTCTTATAAAGGTTGCCATTTATACTGGAAATGTTCTGACATTGCAAATGTCGAAGCCGCCTCAATTTCGTTACAAGAGTGGACAATACATGTTTGTACAATGTCCTGCTGTTTCTCCATTTGAGTGTTGGTTGATATCTACACTTACGTACGACAGGCATCCGTTTTCTATTACCTCTGCTCCTGGAGATGACTACCTGAGTGTTCACATAAGGCAACTGGGAGATTGGACACAGGAGCTCAAAAGGGTATTTTCTGCGGCCTGTGAGCCTCCCGTAGCTGGGAAGAGCGGCCTTCTCAGGGCTGATGAAACCACCAAGAAATGCTTACCAAAGCTAAGGATAGACGGACCTTACGGTGCGCCAGCGCAAGACTACAGAAACTATGATGTCCTACTACTTGTCGGTCTCGGGATTGGAGCAACACCTTTTATTAGCATTCTAAAAGATCTTCTCAACAATATTGTCAAAATGGAGGAGCTGGCGGACTCGGTCTCTGATTCCAGTAGAGGCTCAGACCTTAGCACTGGGACTGCAGATTCGCTGTCTTCTAATAAGATTTCTCCGAAACGGAAGAAGACACTTAAGACTACCAATTCTTATTTCTACTGGGTAACAAGGGAACAAGGTTCTTTCGATTGGTTTAAAGGGGTCATGAATGAAGTTGCTGAACTTGATCAAAGGGGTGTTATTGAGATGCACAACTACTTAACTAGCGTATACGAGGAAGGCGATGCCAGGTCCGCCCTCATTACTATGGTGCAAGCCCTCAACCATGCAAAAAATGGAGTTGATATTGTTTCTGGGACTAGGGTGAGAACTCATTTTGCTAGGCCAAACTGGAAGAAGGTTTTCTCTAAAATATGTTCCAAGCACTGCAATGGACGAATAGGGGTATTCTATTGTGGCGCACCAGTTTTGGCCAAAGAATTAAGCAGGCTCTGCTTCGAGTTCAACGAAAAAGGTCAAACAAAATTTGAGTTCCATAAGGAGCATTTCTAA 2994 0.4673 MVACGSRGFSGFCRFRWCSSEICCECVNGSGGWTIFVVVGFHGGQRSSLMMYFGWLEKVIMDGAPKHERRWASDTVPDVAFVSGGTSPGTESYSVADEYVEVTLDVQDDHTIVLRGVESVTVVNVDEGFAASGNETPVSSAWSPSIRRSSPSRWRQFSQELKTEAVAKARQFSQELKAELRRFSWSQGGSETAFLPRDLRKQRAQLERNSSGTKKALRGLKFISSKSNGADAWNEVQSNFDSLAKDGFLYRTDFAQCIGMKDSKEFALELFDALGRRRRLRVEKISRDELTEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGRRARSPIRRISRRMIYYLQENWKRLWVLALWVSVMIGLFTWKFIEYKRKNAYHVMGYCLLAAKGAAETLKFNMALILFPVCRNTITWLRSTKLAYIAPFDDNINFHKTIAAAVVIGVILHAGNHLACDFPRLVNSSEKMYEKYLDGVFGDHKPSYGDLIKGVEGMTGILMVILMAIAFTLATKWFRRNLIKLPKPLNRLTGFNAFWYSHHLFVIVYVLLIIHGVNLYLERKWHLQTTWMYLAVPIVLYVGERTLRYFRSGFYTVRLIKVAIYTGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFECWLISTLTYDRHPFSITSAPGDDYLSVHIRQLGDWTQELKRVFSAACEPPVAGKSGLLRADETTKKCLPKLRIDGPYGAPAQDYRNYDVLLLVGLGIGATPFISILKDLLNNIVKMEELADSVSDSSRGSDLSTGTADSLSSNKISPKRKKTLKTTNSYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKICSKHCNGRIGVFYCGAPVLAKELSRLCFEFNEKGQTKFEFHKEHF 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02420 997 ProSitePatterns EF-hand calcium-binding domain. 314 326 IPR018247 -
Vimu7g02420 997 ProSiteProfiles EF-hand calcium-binding domain profile. 301 336 IPR002048 GO:0005509
Vimu7g02420 997 Pfam Respiratory burst NADPH oxidase 205 304 IPR013623 GO:0004601|GO:0050664
Vimu7g02420 997 SUPERFAMILY EF-hand 231 384 IPR011992 -
Vimu7g02420 997 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 659 789 IPR017927 GO:0016491
Vimu7g02420 997 Coils Coil 812 832 - -
Vimu7g02420 997 Pfam FAD-binding domain 662 786 IPR013112 GO:0016491
Vimu7g02420 997 Gene3D Translation factors 651 752 - -
Vimu7g02420 997 CDD NOX_Duox_like_FAD_NADP 674 939 - -
Vimu7g02420 997 SFLD NADPH oxidase subgroup (NOX) 160 997 - -
Vimu7g02420 997 Pfam Ferric reductase NAD binding domain 793 979 IPR013121 GO:0016491
Vimu7g02420 997 MobiDBLite consensus disorder prediction 830 850 - -
Vimu7g02420 997 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 790 997 IPR039261 -
Vimu7g02420 997 Gene3D - 784 997 IPR039261 -
Vimu7g02420 997 Gene3D - 206 322 - -
Vimu7g02420 997 Pfam Ferric reductase like transmembrane component 464 620 IPR013130 -
Vimu7g02420 997 PRINTS Cytochrome B-245 heavy chain signature 798 815 IPR000778 GO:0016020|GO:0016491
Vimu7g02420 997 PRINTS Cytochrome B-245 heavy chain signature 565 588 IPR000778 GO:0016020|GO:0016491
Vimu7g02420 997 PRINTS Cytochrome B-245 heavy chain signature 775 788 IPR000778 GO:0016020|GO:0016491
Vimu7g02420 997 FunFam Respiratory burst oxidase homolog A 206 322 - -
Vimu7g02420 997 MobiDBLite consensus disorder prediction 830 849 - -
Vimu7g02420 997 Coils Coil 332 352 - -
Vimu7g02420 997 PANTHER NADPH OXIDASE 266 997 - -
Vimu7g02420 997 CDD EFh 284 331 IPR002048 GO:0005509
Vimu7g02420 997 SUPERFAMILY Riboflavin synthase domain-like 662 786 IPR017938 -
Vimu7g02420 997 FunFam Respiratory burst oxidase protein A 784 997 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02420 Vimu-Chr7 20720470 20731230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02420 69 997 Miscellaneous Gene Families AT1G64060 74.477 0.0 1457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02420 K13447 - gmx:100805517 1721.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02420 7 20720470 20731230 Vimu7g02420 7 20720470 20731230 ECH
Vimu7g02420 7 20720470 20731230 Vimu11g04466 11 65742260 65750675 PCT