Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04466 ATGAGTGCTATTCCGAGGCACGAGCGCCGATGGGCGTCCGACACTGTTCCCGGAAGACCCACTGTCAGCGCCGGAACTTCGCCGGGAACTGATTCCAGCTCCGCCGCCGAGGAGTTCGTGGAGGTTACTCTTGATCTTCAAGATGATGACACCATCGTTCTTCGGAGCGTCGAGCCAGCCTCTGTTATTAACATCGACGACGGCGTCGCCGGCAGCGGATACGAGACTCCGGCGTCGGTATCGCGGTCGCCGACGATTCGGCGGAGCTCGTCGCGGGGCTTCCGGCAGTTCTCACAGGAGCTGAAGGCGGAGGCTGTGGCGAAGGCGAGGCAGTTCTCGCAGGAGCTAAAATCGGAGCTGCGGCGGTTCTCGTGGAGCCATAGCCAGGCTTCGCGCGCGCTTTCGTCTTCCTCGGGTCCTAACGGCGCCGGAGGTGGATTCGAAACGGCGCTGGCCGCTCGTGCTCTCAGGAGGCAACGCGCGCAACTTGATCGCACGCGCTCCGGTGCGCACAAAGCGCTTCGCGGTCTGAAATTTATCAGTAGCAAATCGAATGGTGTTGATGCGTGGAACGAGGTGCAGAACAGCTTCGATATACTCTCTAAGGATGGATTTCTCAATCGGGCCGATTTTGCGCAATGCATAGGTATGAAGGATTCGAAGGAATTCGCTCTGGAACTGTTTGATGCTCTGAGTCGTAAACGAAGGTTGAGAGTTGACAATATCAACAAGGAAGAACTGTTTGAATTCTGGTCGCAAATTACTGATCAAAGTTTCGATTCCCGGCTTCAGATCTTCTTCGACATGGTGGACAAGAACGAGGATGGGAGAATCACAGAAGAAGAAGTGAAAGAGATCATCATGTTAAGCGCTTCTGCAAATAGGTTGTCCAGATTGAAGGAACAGGCCGAAGAATATGCAGCTCTTATCATGGAAGAGTTAGACCCCGAAGGACTTGGCTACATCGAGCTATGGCAACTGGAGACGCTTCTTTTACAAAAGGACACGTATCTCAACTACAGTCAAGCTCTAAGTTACACAAGCCAAGCTCTGAGCCAGAACCTACAGGGGTTAAGGAAGAAAAGTCCAATACGTAGAATGAGCCGCAGATTGATCTACTATTTGCAAGAGAATTGGAAGAGACTTTGGGTTTTAACATTGTGGGCTTGCATAATGACGGGGCTATTCACGTGGAAGTTTATACAGTACAAGCGGAAAGATGCATTTCATATCATGGGTTATTGTCTTTCCACGGCCAAGGGTGGGGCTGAGACTCTAAAATTCAACATGGCCCTTATACTCTTGCCCGTGTGCAGAAACACCATAACTTGGCTCAGGTCTACAACCAAGCTGGGCTATGCTGTACCTTTTGATGACAACATCAACTTTCACAAGACAATTGCTGGAGCCATTGTGATTGGTATTATACTTCATGCCGGAGATCACCTTGCTTGTGATTTTCCAAGACTTGTAAGTACGTCTGAAGACAATTATGAGAAGTATTTGAAAGGTGTATTTGGTGATAATAAACCCAGTTACGGAGACCTGGCTAAAGGCGTCGAGGGTGTGACTGGAATTTTGATGGTGATTCTTATGATAATAGCATTTACACTTGCAACCAAATGGTTCCGGAGAAATCTCATTAAGCTGCCTAAACCATTTAGTCGGCTCACTGGCTTCAATGCTTTCTGGTATTCACATCATCTGTTTGTCATCGTATACGTCCTTCTTATAATCCACGGAACAAAACTTTACCTCGTGCATAAATGGTACCTTAAAACGACATGGATGTATCTTGCGGTTCCAGTTTTACTTTATACGTCCGAAAGAATACTCAGACTATTTCGTTCTGGTCTGTATACAGTTCGTCTTGGAAAGGTTGCCATATATCCTGGAAATGTTCTCACATTGCAAATGTCTAAGCCTCCTCAATTTCGTTACAAGAGCGGACAATACATGTTTGTGCAGTGTCCTGCTGTTTCTCCGTTTGAATGGCATCCGTTCTCTATTACCTCAGCCCCTGGCGACGACTACCTGAGTGTTCATATTCGGCAACTGGGTGATTGGACACAGGAGCTTAAAAGGGTGTTCTCTGAGGCCTGTGAGCCTCCTGTATCTGGGAAGAGTGGGCTTCTCAGGGCTGATGAAACCACTAAGAAAAGTTTGCCGAAGTTAAAGATCGATGGACCTTACGGTGCACCGGCACAAGATTATAAAAAATATGATGTTTTGTTACTAGTCGGTCTCGGGATAGGAGCAACACCTTTCATCAGCATTCTAAAAGATCTTCTCAACAACATCATCAAAATGGAGGAAATGGCGGATTCAATCTCTGATATAAGTAGAGGTTCAGACCTTAGTGTTGGGAGTACTACAGACTCACCATCTCTTAATAAAATTGCGCCAAAACGGAAGAAAACACTGAAGACCACCAACGCTTATTTTTACTGGGTTACAAGAGAGCAAGGTTCTTTTGATTGGTTCAAAGGAGTCATGAATGAAGTAGCAGAGCTTGATCAAAGGGGTGTCATTGAGATGCACAACTACTTGACCAGCGTATACGAGGAAGGGGATGCTAGATCTGCCCTCATCACCATGGTACAAGCACTCAACCATGCCAAAAACGGAGTTGACATTGTTTCTGGGACCAGAGTGCGAACTCATTTTGCTAGGCCCAACTGGAAGAAGGTTTTCAATAAAATGTGCTCCAAGCACTATAATGGAAGAATAGGGGTATTTTATTGTGGTGCACCAGTTTTGGCCAAAGAACTGAGCAAGCTCTGCTTCGAGTTCAATGAAAAGGGTCCAACAAAATTTGAGTTCCACAAGGAGCACTTTTAA 2841 0.4688 MSAIPRHERRWASDTVPGRPTVSAGTSPGTDSSSAAEEFVEVTLDLQDDDTIVLRSVEPASVINIDDGVAGSGYETPASVSRSPTIRRSSSRGFRQFSQELKAEAVAKARQFSQELKSELRRFSWSHSQASRALSSSSGPNGAGGGFETALAARALRRQRAQLDRTRSGAHKALRGLKFISSKSNGVDAWNEVQNSFDILSKDGFLNRADFAQCIGMKDSKEFALELFDALSRKRRLRVDNINKEELFEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANRLSRLKEQAEEYAALIMEELDPEGLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRKKSPIRRMSRRLIYYLQENWKRLWVLTLWACIMTGLFTWKFIQYKRKDAFHIMGYCLSTAKGGAETLKFNMALILLPVCRNTITWLRSTTKLGYAVPFDDNINFHKTIAGAIVIGIILHAGDHLACDFPRLVSTSEDNYEKYLKGVFGDNKPSYGDLAKGVEGVTGILMVILMIIAFTLATKWFRRNLIKLPKPFSRLTGFNAFWYSHHLFVIVYVLLIIHGTKLYLVHKWYLKTTWMYLAVPVLLYTSERILRLFRSGLYTVRLGKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELKRVFSEACEPPVSGKSGLLRADETTKKSLPKLKIDGPYGAPAQDYKKYDVLLLVGLGIGATPFISILKDLLNNIIKMEEMADSISDISRGSDLSVGSTTDSPSLNKIAPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFNKMCSKHYNGRIGVFYCGAPVLAKELSKLCFEFNEKGPTKFEFHKEHF 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04466 946 MobiDBLite consensus disorder prediction 76 94 - -
Vimu11g04466 946 SFLD NADPH oxidase subgroup (NOX) 104 946 - -
Vimu11g04466 946 PANTHER NADPH OXIDASE 223 946 - -
Vimu11g04466 946 SUPERFAMILY EF-hand 190 340 IPR011992 -
Vimu11g04466 946 Gene3D - 163 279 - -
Vimu11g04466 946 SUPERFAMILY Riboflavin synthase domain-like 620 733 IPR017938 -
Vimu11g04466 946 Pfam Respiratory burst NADPH oxidase 162 261 IPR013623 GO:0004601|GO:0050664
Vimu11g04466 946 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 617 737 IPR017927 GO:0016491
Vimu11g04466 946 CDD EFh 222 288 IPR002048 GO:0005509
Vimu11g04466 946 ProSiteProfiles EF-hand calcium-binding domain profile. 258 293 IPR002048 GO:0005509
Vimu11g04466 946 MobiDBLite consensus disorder prediction 69 94 - -
Vimu11g04466 946 FunFam Respiratory burst oxidase homolog A 608 700 - -
Vimu11g04466 946 FunFam Respiratory burst oxidase homolog A 163 279 - -
Vimu11g04466 946 Pfam Ferric reductase like transmembrane component 421 578 IPR013130 -
Vimu11g04466 946 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 738 946 IPR039261 -
Vimu11g04466 946 Gene3D Translation factors 609 700 - -
Vimu11g04466 946 FunFam Respiratory burst oxidase protein A 732 946 - -
Vimu11g04466 946 Pfam Ferric reductase NAD binding domain 741 928 IPR013121 GO:0016491
Vimu11g04466 946 ProSitePatterns EF-hand calcium-binding domain. 271 283 IPR018247 -
Vimu11g04466 946 PRINTS Cytochrome B-245 heavy chain signature 523 546 IPR000778 GO:0016020|GO:0016491
Vimu11g04466 946 PRINTS Cytochrome B-245 heavy chain signature 723 736 IPR000778 GO:0016020|GO:0016491
Vimu11g04466 946 PRINTS Cytochrome B-245 heavy chain signature 746 763 IPR000778 GO:0016020|GO:0016491
Vimu11g04466 946 MobiDBLite consensus disorder prediction 19 36 - -
Vimu11g04466 946 Gene3D - 732 946 IPR039261 -
Vimu11g04466 946 Pfam FAD-binding domain 621 734 IPR013112 GO:0016491
Vimu11g04466 946 MobiDBLite consensus disorder prediction 1 36 - -
Vimu11g04466 946 CDD NOX_Duox_like_FAD_NADP 626 888 - -
Vimu11g04466 946 Coils Coil 289 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04466 Vimu-Chr11 65742260 65750675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04466 9 946 Miscellaneous Gene Families AT1G64060 77.719 0.0 1519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04466 K13447 - gmx:100801077 1733.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02420 7 20720470 20731230 Vimu11g04466 11 65742260 65750675 PCT