Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02407 ATGAAAGCTTCAGCTTCTATTTCTGGAACAGGTAAAAGACCACCACCATCACCACAGAAATCAGCTTCTACTTCTGGAGCAGGTAAGAGACCACCACCATCACCACCTGATAAGAATCCTCTTCAATCTGTCGAACTCGTCAAAGACAAGAATGGAATACCGCAACTCATTCTCCGAAATAATGATGCTTCTGCAACTGTTAGTTTGTTAGGAGCTCAAGTTATTTCTTGGAAAACGAAAGTAACCGGAGAGTTACTCTTCTTAAGCAAGAAAGCAATCTTTAAACCTCCCAATGCTGTAAGAGGAGGAATTCCAATCTGTTTTCCAGAATTCAAAACCAGAGAAACAGGGGGGGAGAATCATGGATTTGCCAGAAACAGGATCTGGGTTATCGAAGAAAATCCTCCACACCTTTCAGGTGATTTCAAGGAAAAAGTGTACGTTGATTTGTTGCTAAAATCATCTAAAGAAGATGCCAAAATATGGCCACATAGCTTCGAGTTTCGCCTAAGAATTTCTTTGACAGCACTGGGCATTCTGGATTTGACATCACGCATCAGAAATGTGGATAGAAAGAATTTCAGTTTCTGCATGGTCTATCATACATATTTGTTAGTCTCCGATATTTGGGAGGTGAGGATAGAAGGGTTGGAAACTCAATACTATCTCGACAACCTATTGCAGAAACAACGATTTACAGAACAGGGAGCTTCTTTGACATTTGAATCAGAGGTTGATAGAATTTATACTGATTGTAACAATGTGGTTGCTGTTCGGGATCATTACAAGAAGAGAACAGTGATAATAAGAAAGGATGGACTTCCTGATATTGTTGTTTGGAATCCTTGGATCAAAAAGTCGAAGTCCATAGCAGATTTAGGGGATAAAGAGTACCAGCAAATGCTCTGCGTTGATGGTGCAGCAGTTGAAAACCCAATCACCCTGAAGCCTGGTGAAGAATGGAAAGGATGCTTAGAACTGTCAATTCTTCTATCTTCTTGA 1002 0.4032 MKASASISGTGKRPPPSPQKSASTSGAGKRPPPSPPDKNPLQSVELVKDKNGIPQLILRNNDASATVSLLGAQVISWKTKVTGELLFLSKKAIFKPPNAVRGGIPICFPEFKTRETGGENHGFARNRIWVIEENPPHLSGDFKEKVYVDLLLKSSKEDAKIWPHSFEFRLRISLTALGILDLTSRIRNVDRKNFSFCMVYHTYLLVSDIWEVRIEGLETQYYLDNLLQKQRFTEQGASLTFESEVDRIYTDCNNVVAVRDHYKKRTVIIRKDGLPDIVVWNPWIKKSKSIADLGDKEYQQMLCVDGAAVENPITLKPGEEWKGCLELSILLSS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02407 333 Gene3D - 36 330 IPR014718 GO:0030246
Vimu7g02407 333 MobiDBLite consensus disorder prediction 1 42 - -
Vimu7g02407 333 Pfam Aldose 1-epimerase 56 325 IPR008183 GO:0005975|GO:0016853
Vimu7g02407 333 CDD D-hex-6-P-epi_like 56 328 IPR025532 -
Vimu7g02407 333 PIRSF PHexose_mutarotase 34 332 IPR025532 -
Vimu7g02407 333 SUPERFAMILY Galactose mutarotase-like 49 327 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vimu7g02407 333 MobiDBLite consensus disorder prediction 1 28 - -
Vimu7g02407 333 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 45 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02407 Vimu-Chr7 20619850 20621384 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02407 K01792 - gmx:100782696 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02407 7 20619850 20621384 Vimu7g02407 7 20619850 20621384 ECH
Vimu7g02407 7 20619850 20621384 Vimu11g04488 11 65888333 65891226 PCT