Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04488 ATGATTGATGGTTATTTCCATCATTCCATAATTCTACCATCACCAGCATTTGCAGTAACAAACCCATTGGCTTCGGCCTCTAGTACTTACACGAATGTTCCACCATCTGGGTTGAAACTCGGTACCACTCTACTTCAACTCTACTGGCTTGAGTTTAGTTCGAGAATTGACCCTTTCTATGTGTTATTGGATAAGATTAAGACGAAGTTTATACAATCAGCGAGGTGTTTGGATATGAATCATTCTGGGGCTGGAAGTGATGATATAAGAGCGGTTGAAATTACCAAGGATAGGAATGGAATAGGCCTAGTGGTTCTGCGGAACCATCGAGGAGCCTCAGCAAGGGTTAGTTTGCACGGAGGGCAGGTTCTTTCATGGAAATGGGAACGTGGGGAGGAGCTTTTGTTCACTAGTAGTAAGGCAATCATAAGTCCTCTCAAACCATTACGAGGAGGAATTGCAATCTGTTTCCCTCAGTTCAGAAACCGTGGATCATTAGAGCATCATGGGTTTGCCCGGAACAAAATGTGGGTAATTGATCAAGATCCTCCACCGTTACCCACTGATTCCGGTGAAAAAGCCCATATTGACTTGCTGCTCAAACCAACAGAAGATGATCTGAAAATATGGCCACATAGCTTCGAACTTCGGTTAAGGGTCTCTTTGGGAGGAAATGGATATTTAACTCTGATTTCTCGCGTCAGGAACGTCAATAGCAAGCCCTTCAGTTTCTCCTTTGCGTACCATACATATTACTCTGTCTCTGATATCAGTGAAGTGAGGGTGGAAGGATTGGAAACTCTTGACTATCTAGACAACTTACAGAACCAAGAACGCTTCACGGAACAAGGAGATGCATTGACATTTGAATCAGAGGTGGATCGAGTGTATCTTGATTCGGGTAGCAGTGGGGTGGCTGTTCTAGACCACGAAAAGAAGCAGACAATTGTCATAAGAAAGGAAGGACTCCCAGATGTTGTTGTTTGGAATCCGTGGGAGAAAAAGTCCAAGGCGATAGTGGATTTGGGAGATGAAGAGTACAAACAGATGGTGTGCGTGGATGGTGCAGCGATTGAGAAACCAATCACGTTGAAGCCAGGTGAAGAATGGACTGGCCGCTTGGACCTCTCTGTGGTCCCTTCCACTTGA 1149 0.4482 MIDGYFHHSIILPSPAFAVTNPLASASSTYTNVPPSGLKLGTTLLQLYWLEFSSRIDPFYVLLDKIKTKFIQSARCLDMNHSGAGSDDIRAVEITKDRNGIGLVVLRNHRGASARVSLHGGQVLSWKWERGEELLFTSSKAIISPLKPLRGGIAICFPQFRNRGSLEHHGFARNKMWVIDQDPPPLPTDSGEKAHIDLLLKPTEDDLKIWPHSFELRLRVSLGGNGYLTLISRVRNVNSKPFSFSFAYHTYYSVSDISEVRVEGLETLDYLDNLQNQERFTEQGDALTFESEVDRVYLDSGSSGVAVLDHEKKQTIVIRKEGLPDVVVWNPWEKKSKAIVDLGDEEYKQMVCVDGAAIEKPITLKPGEEWTGRLDLSVVPST 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04488 382 SUPERFAMILY Galactose mutarotase-like 97 375 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vimu11g04488 382 Gene3D - 99 379 IPR014718 GO:0030246
Vimu11g04488 382 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 92 381 - -
Vimu11g04488 382 Pfam Aldose 1-epimerase 103 375 IPR008183 GO:0005975|GO:0016853
Vimu11g04488 382 CDD D-hex-6-P-epi_like 104 377 IPR025532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04488 Vimu-Chr11 65888333 65891226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04488 K01792 - zju:107430124 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02407 7 20619850 20621384 Vimu11g04488 11 65888333 65891226 PCT