Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02389 GGAATTGCCACAGTGATGGCACAGAAGAGCTTCATCGTTGAGGTCGAGAAAGCGAAGGAGGCGAGCGAAGGAAGGCCATCGAGAGGACCTGTGTACCGTAGCCTCTTCGCCAAGGATGGATTCCCTGCTCCTATCGAAGGTCTCGATTGCTGCTGGGACGTTTTCCGATTGTCCGTTGAGAAATATCCAACTAGTCCAATGCTTGGTCGCCGGGAAATTGTGAATGGGAAGGCAGGCAAGTACAAGTGGTTAACATACAAAGAAGTATATGACCAGGTGATTAAGGTTGGGAATTCCATCCGCAGCTGTGGTTATGGAGAAGGTGTAAAGTGCGGTATTTATGGTGCCAATTCAGCAGAATGGGTTATGAGCATGGAGGCCTGCAATGCTCATGGACTCTATTGTGTACCTTTATATGATACCTTGGGTGCTGGAGCTATAGAATTTATTATATGCCACGCAGAGGTCTCAATTGCATTTGTAGAAGAAAAGAAGATGCCCGAGCTATTGAAGACATTTCCAAATGCAACAAAGTATCTCAAGACAATTGTAAGCTTCGGAAAGGTTACCCCTGAACAAAAGGAAGAAGTTGAGAAGTTTGGGTTGGCAATATATTCGTGGGATGAATTTTTGCAAGTGGGTCAAGGTCAGAGTTATGATCTTCCAATTAAGAAAAGGAGTGACATCTGTACAATAATGTATACTAGTGGAACTACAGGTGACCCCAAGGGAGTGTTGATATCAAATGAGAGTATTATCACTCTCTTAGCCGGGGTAAAGAGACTGTTGGAGAGTGTCAATGAACAAGGTACTGAATGCATAGCTATCCTTTTTTTGACTCTCACAGTTTCCCTTCTTTTCCCTTCTTTGCAGTTGACTGAGAAGGATGTATACATATCATACCTTCCTCTTGCACATATCTTTGATAGGGTCATTGAGGAAACATTCATATGGCATGGTGCTTCAATAGGTTTCTGGCGTGGGGATGTCAAATTGCTAATTGAAGATATTGGGGAACTAAAACCAACTGTTTTCTGTGCTGTTCCCCGTGTGCTTGATAGAGTGTACTCAGGTTTGACACAGAAGATTGCTTCTGGGGGCTTCTTGAAGAGGACATTATTCAACTGTGCTTATTCATATAAGCTGAATAACATGAAGAAAGGGTTTACCCATGGAGAAGCATCCCCTATTTGTGATAAAATTGTATTTGATAAGGTAAAGCAGGGTTTAGGAGGTAGAGTTCGTCTTATTTTGTCTGGAGCAGCACCTTTATCTGCACATGTGGAAGGTTACTTACGGGTGGTGACTTGTTGTCATGTCCTACAAGGATATGGCCTGACTGAAACCTGTGCGGGAACCTTTGTCTCATTACCAAATGAAATGGAAATGCTTGGAACGGTGGGCCCACCAGTACCAAATGTTGATGTGTGCCTGGAATCTGTTCCTGAAATGGGATATGATGCCCTAGCAAGCACACCAAGGGGAGAAATTTGTGTAAAGGGTAAAACCTTGTTTTCAGGGTACTACAAACGTGAAGATCTCACCAAAGAGGTTCTGATCGATGAATGGTTCCATACAGGGGATATTGGAGAGTGGCAACCTAATGGAAGCATGAAAATTATTGATAGGAAAAAGAATATATTTAAACTTTCACAGGGAGAATATGTTGCTGTCGAAAACCTGGAGAACATTTATGGTCAAGTTTCATCTATTGAATCTATATGGGTTTACGGAAACAGTTTTGAGGCCTTCCTTGTTGCTGTTGTTAATCCTAGAAAGGAAGCACTTGAACAATGGGCACGAGAAAATGCTATATCCAAGGACTTCAATTCTCTTTGTGAAGATGCTAGAGCAAAAAGTTACATACTTGAAGAGCTCTCAAAGATTGCAAAGGAAAAGAAGTTGAAAGGTTTCGAGTTTATAAAAGGAGTTCATCTTGACCCGATTCCATTTGACATGGAACGTGACCTTATCACTCCAACATATAAGAAGAAGAGGCCACAGTTGCTTAAATTTTATCAGGTACAAGTTGTCAAATTCTCAGGATTTCATTTCACTTCATATTGA 2067 0.418 GIATVMAQKSFIVEVEKAKEASEGRPSRGPVYRSLFAKDGFPAPIEGLDCCWDVFRLSVEKYPTSPMLGRREIVNGKAGKYKWLTYKEVYDQVIKVGNSIRSCGYGEGVKCGIYGANSAEWVMSMEACNAHGLYCVPLYDTLGAGAIEFIICHAEVSIAFVEEKKMPELLKTFPNATKYLKTIVSFGKVTPEQKEEVEKFGLAIYSWDEFLQVGQGQSYDLPIKKRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNEQGTECIAILFLTLTVSLLFPSLQLTEKDVYISYLPLAHIFDRVIEETFIWHGASIGFWRGDVKLLIEDIGELKPTVFCAVPRVLDRVYSGLTQKIASGGFLKRTLFNCAYSYKLNNMKKGFTHGEASPICDKIVFDKVKQGLGGRVRLILSGAAPLSAHVEGYLRVVTCCHVLQGYGLTETCAGTFVSLPNEMEMLGTVGPPVPNVDVCLESVPEMGYDALASTPRGEICVKGKTLFSGYYKREDLTKEVLIDEWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYGQVSSIESIWVYGNSFEAFLVAVVNPRKEALEQWARENAISKDFNSLCEDARAKSYILEELSKIAKEKKLKGFEFIKGVHLDPIPFDMERDLITPTYKKKRPQLLKFYQVQVVKFSGFHFTSY 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02389 688 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 676 - -
Vimu7g02389 688 Pfam AMP-binding enzyme 70 551 IPR000873 -
Vimu7g02389 688 SUPERFAMILY Acetyl-CoA synthetase-like 48 674 - -
Vimu7g02389 688 ProSitePatterns Putative AMP-binding domain signature. 232 243 IPR020845 -
Vimu7g02389 688 Gene3D - 48 543 IPR042099 -
Vimu7g02389 688 CDD LC-FACS_euk 79 677 IPR045311 GO:0004467|GO:0006631
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02389 Vimu-Chr7 20505567 20513861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02389 8 674 Acyl Lipid Metabolism Gene Families AT4G23850 73.163 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02389 K01897 - gmx:100814965 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02389 7 20505567 20513861 Vimu7g02389 7 20505567 20513861 ECH
Vimu7g02389 7 20505567 20513861 Vimu11g04517 11 66092272 66098558 PCT