Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02387 ATGGTCTCTTTAATGGATGATGTTCCTTGCGAAGCAAAGGTCATCCCTAATCATTATCGATTTCCTACATCTGGTGTAGAATCTCTTGAGAATGGAACGCCTTCTATGACAAAACCTGGAACTGCTAAATCTCTTAGGATAGTTTCCATGTTCAAATTGTTTACTCTTCCGAGGCTGTCATGGAGCTCCGGTAATGGTGCTCAGGAAAAGGTAGTGCTAACAGCTGCTGAAGTAGAGTCACTTCGATCAGAACTTGCTGACATAGAAGAGAGGGAAGCTCAATTGAAAGCTCGGTTGGAAAACATTGATGAAACCTTGCGGTCAGCTCGTCTATCTGGCTATTTGTACATTCGAAAAAGATGGGCAGCACTTCCAGGAGAACCTCCACCTATAGATGACACTGACATAGATGATTGGCTTCCTCGCTTTGTTGTTCTTTATGGTGCATGTCTATACTTATATTTGTTGTGTACAGATCTAAGTCCTCACGATTCAACACTTTTATCCGATATTGTTGAAATAGACCAACTACCGAGTTTTAAGCGTGAAGATGATGAGACGCGACACGCCTTTTATATCTTAACTCGTCATGGTTTACGATATGAATGCTCAAGCAGTTCTAAAATACAGGTGGACTCGTGGTTATCAGCTTTAAACTTTGACTGCAAATTGGAATCTGATACATCAAAGCCCAAATAG 699 0.412 MVSLMDDVPCEAKVIPNHYRFPTSGVESLENGTPSMTKPGTAKSLRIVSMFKLFTLPRLSWSSGNGAQEKVVLTAAEVESLRSELADIEEREAQLKARLENIDETLRSARLSGYLYIRKRWAALPGEPPPIDDTDIDDWLPRFVVLYGACLYLYLLCTDLSPHDSTLLSDIVEIDQLPSFKREDDETRHAFYILTRHGLRYECSSSSKIQVDSWLSALNFDCKLESDTSKPK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02387 232 SUPERFAMILY PH domain-like 102 220 - -
Vimu7g02387 232 Gene3D - 93 220 IPR011993 -
Vimu7g02387 232 PANTHER OS05G0595500 PROTEIN 45 229 - -
Vimu7g02387 232 ProSiteProfiles PH domain profile. 108 223 IPR001849 -
Vimu7g02387 232 Coils Coil 71 105 - -
Vimu7g02387 232 CDD PH 111 218 - -
Vimu7g02387 232 SMART PH_update 109 225 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02387 Vimu-Chr7 20491613 20494479 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02387 - - ccaj:109810881 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02387 7 20491613 20494479 Vimu11g04519 11 66106057 66110917 PCT