Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04519 ATGGGAAAAAAGTTCATGGGCAAAAGTGTCTTTTCGCGCGCGCTGTACGAAACAAACACCAGCTTCTTGGGCTTCGAGCCGCTTTCTGTTTCATTCCAGCGAGGAAAGTGTCCGTCCTCAAAAACCCTTCTCTGGCTTTTGTTGATCACGTGGAGCGATTGTATAGGTGAAGTCTATTCCTCACACTATTTGAATGAGCATCCGACTCTTTCTGGGTTATCGAGGGAGGAAATAATGGAAGAAGGATACTGTTGGTTTGTTATGGCAGCTGGCAAACCAATGCCTAGTTTAACCACAACTATTCTGGGACTGCTTGTTTTGGATGGTCTAACGATTTGCCCGGTGTTAGTCCACGATGTCTTTTGTTTGGGGTTGGTGGTGGACTGCCGTCCTTTCTTCTTGTTGAAGGTAAATTTAATGGATGATGGTCCCCCGAAACTAAAAATCATTCCTGATCACTTTCAAGTTCCAACAGCAAGTTTAGAATCCCCTGAGAGCAGAACATCATCTATTACAGAGCCTGGAACTGATCAATCTTCAAGGAAATTAAGGACAGCTTTCATGTTGAACTTGTTTTCTCCTCGGCGACTGTCATGGGGTTCCAGTACTGGAGGTCAGGAAAAGGTTGAGCTAACAGCTGCGGAAGTAGAATCACTTCGAACAGAACTTGCTGATATAGAGGAGAGGGAAGCTCACTTGAAAGCTCAGTTGGAACATATTGATGAAGTTTTGCGGTCTGCTCGTTTATCTGGATATTTATACATTCGAACTGTACTAACTGCCTGCCCTACACCAAGATGGGCAGCACTACCAGGAGAACCTGCACCGATAGATGATACTGAAGTAGATGATCGGCTTCCTCGTTTTGTTGTTCTCCATGATCTAAGCCCCCAGGACTCAACTCTTCTATCTGATATCATTGAAGTAGGGAGTTTACCATGTTTTAAGCAAGAAGATGATGAAATTCAGTATGCCTTTTATATTTTAACTCGTCATGGATTGCGATATGAATGCTCAAGCAGTTCTAAGATACAGGTCGACTCTTGGTTATCAGCTTTACAAAGCGAATGCAAATTGGAATGTGATACATTTTCTAAAGCTGACTGCAAACCGGAATCTGATACTTCAGTTCCCAATGGTTCGACTGAGATGTAG 1155 0.4338 MGKKFMGKSVFSRALYETNTSFLGFEPLSVSFQRGKCPSSKTLLWLLLITWSDCIGEVYSSHYLNEHPTLSGLSREEIMEEGYCWFVMAAGKPMPSLTTTILGLLVLDGLTICPVLVHDVFCLGLVVDCRPFFLLKVNLMDDGPPKLKIIPDHFQVPTASLESPESRTSSITEPGTDQSSRKLRTAFMLNLFSPRRLSWGSSTGGQEKVELTAAEVESLRTELADIEEREAHLKAQLEHIDEVLRSARLSGYLYIRTVLTACPTPRWAALPGEPAPIDDTEVDDRLPRFVVLHDLSPQDSTLLSDIIEVGSLPCFKQEDDEIQYAFYILTRHGLRYECSSSSKIQVDSWLSALQSECKLECDTFSKADCKPESDTSVPNGSTEM 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04519 384 Coils Coil 209 243 - -
Vimu11g04519 384 SUPERFAMILY PH domain-like 242 357 - -
Vimu11g04519 384 PANTHER OS05G0595500 PROTEIN 135 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04519 Vimu-Chr11 66106057 66110917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04519 - - gmx:113002366 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04519 11 66106057 66110917 Vimu11g04519 11 66106057 66110917 ECH
Vimu7g02387 7 20491613 20494479 Vimu11g04519 11 66106057 66110917 PCT