Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02039 ATGGCTTCTTTACAGACCACACCTCTCCTCTCTTCTTTAACAAAAATCAACGCTTCTATTCGTCTCCCTAACCCTCCACAACTCTCTCCTTCTCTCCCACAGCTACCATCAACAACACTGCGCATTGATCAACTTAATGGCTCCACACGCACAATTCCATTGGAGAACAATGTCGTTACCACACACATATATCAAGATTTATTCACTCCCACCGACAAATCATCTAATAACCTCACTCTTCAACTCTACGCAATTTTGGAGCAAGTTTCTGACAGAATTGAAATGCACAAAAACATTGGCGAACAGAGAAACAACTGGAATACTCTTCTTCTTAATTCCGTCAACATGATCACTCTCACTGCCACAGCCATGGCTGGTGTTGCTGCAGCCACCACTGGTGACACCGGGGCACCGCTTTTGGCCTTGAAACTATCATCAACGCTCTTGTTTTCTGCCGCCACAGGGATGTCACTCATCATGAACAAAATTCAGCCCTCACAACTCGCCGAGGAGCAACGCAATGCTACAAGGTTGTTTAAAGAGCTTCATACCCAAATCCAAACCCTAATCACTATTGGAAATCCCACAGAGAAAGATGTGAAGAGTTCAATAGAGAAGGTGTTGGCACTCGACAGAGCTTACCCACTTCCCTTGTTGGGAGTCATGCTTGACAAGTTTCCCCAAAAATATGAACCTGCGGTCTGGTGGCCTTCGTCTCAGTCCCAGAGAAAAAGTACAACACAAGAAAGGGAAAGGTCTAACAATGGATGGAGTGAAGAGCTTGAAAAGGAGATGAGGGAAGTGATCGAAGTGATAAAGAAGAAAGACAGTGAGGACTATGAGAGGCTGGGAAACATAGCGTTGAAGGTGAGCAAGAGTCTTGCAATTGCGGGGCCTTTACTGACTGGGATTGCAGCAGTGGGGTCTTCTTTTGTGGGGAATGGCTCATTGGCTGCATTAGTGCCTCTCATGGCTGGCTCATTGGCTTCAGCTGTTAATGCATTTGAGCACGGTGGCCAAGTGGGCATGGTGTTCGAAATGTACAGAAACTGTGGTGGATTCTTCACGCTTTTGGAAGAGACCATTAGGGACACTCTTGAAGAGAAAGACACTGAGAAAAGAGAAAACGGTGAAGTTTTTGAAATGAAAGTGGCAATGAAGTTGGGAAGAAGCGTTTCGGGGCTGAGACGCCTTGCCTCAAAATCTGCTTACTGTGGTGTGGAAGGAATTGCCGTCGATGAATTCGCCAGCAAGCTCTTCTAA 1263 0.4608 MASLQTTPLLSSLTKINASIRLPNPPQLSPSLPQLPSTTLRIDQLNGSTRTIPLENNVVTTHIYQDLFTPTDKSSNNLTLQLYAILEQVSDRIEMHKNIGEQRNNWNTLLLNSVNMITLTATAMAGVAAATTGDTGAPLLALKLSSTLLFSAATGMSLIMNKIQPSQLAEEQRNATRLFKELHTQIQTLITIGNPTEKDVKSSIEKVLALDRAYPLPLLGVMLDKFPQKYEPAVWWPSSQSQRKSTTQERERSNNGWSEELEKEMREVIEVIKKKDSEDYERLGNIALKVSKSLAIAGPLLTGIAAVGSSFVGNGSLAALVPLMAGSLASAVNAFEHGGQVGMVFEMYRNCGGFFTLLEETIRDTLEEKDTEKRENGEVFEMKVAMKLGRSVSGLRRLASKSAYCGVEGIAVDEFASKLF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02039 420 Coils Coil 258 278 - -
Vimu7g02039 420 Pfam Petal formation-expressed 81 396 IPR027949 -
Vimu7g02039 420 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 1 420 IPR027949 -
Vimu7g02039 420 MobiDBLite consensus disorder prediction 237 259 - -
Vimu7g02039 420 MobiDBLite consensus disorder prediction 245 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02039 Vimu-Chr7 18272698 18275150 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02039 - - gmx:100794664 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02039 7 18272698 18275150 Vimu7g02039 7 18272698 18275150 ECH
Vimu7g02039 7 18272698 18275150 Vimu2g01111 2 7362113 7363405 PCT