Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01111 ATGTCTTCCTTACGGTTTTCCATACTTAATAATTACCCTTTACATTCTTCACCATCTTCTTCATCTTTCAAGAGAATCAATTCTTCTATCAATCTCCCTAAACTACCTCAAGTCTCCTCTTCAGTTCCCAAACTGCTATCATCATCATCATCATCATCATCATCTACCAGAACCATGGTTGAGGAACTGGCAAAATTCAGAGTCACAGACAATTATAAATCCTCTTTTGTGGAAAAGAATCATACCAACAAAATACTGCACGATACAAATTCCGAGGCCATTATTCAACTCTACGCAATCTTAGAGGCTGTGGTTGACAGAATTGAAATGCACACCAACGTTGGAGAGCAACGTAACAATTGGAACACCCTCGTGTTAAACTCCATCAACATGCTAACGCTCACTGCCTCAACCATGGCCGGTGTTGCAGGCACGGCTACTGGTGAAGGGGCACCGCTTTTCGCTCTTAAACTATCATCTGCTCTTTTGTTTTCTGCAGCCACTGGGATGCTGCTTGCTACCAACAAAATCCAACCCTCACAACTTGCTGAGGAACAAAGAAATGCTGCAAGGCTTTTTAAGCAGCTTCAGGCACAGATCCAAACCACAATCGCTGTTGGAAATCCCAGTGAAAGTGATGTGAGGGGTGCTATGGAGAGGGTTTTGGCGTTGGACAAAGCTTATCCAATGCCTTTGTTAGGAGGAGCAATGCTTGAAAAGTTTCCTGAAAAGTTTGAAGCTGCTAGATGGTGGCCAGAAAGTAGATTGAACAATGAGAAAGCACAGACGAAGGTTAAGAGCAATAATGGATGGAGTATGGAGTTGGAAGAGGAAATGAGGGAGGTTATTGAAGTGGTGAAGAGAAAAGACATGGAAGATTACGAGAGGTTGGGGAACATTGCACTGAAGATAAACAAGGGTTTAGCTATTTCAGCACCTTTGCTCACGGGAATTGCTGCATTAGGATGTGTGTTTTCAGGAGACGGATTAGTTCCTGTGGTAGCAGGGGCCTTGGCTTCAGTGGTGAATGCTCTAGAGCATGGAGGCCAAGTTGGAATGGTGTTTGAAATGTACAGAAACTGTGGTGGATTTTTCCAGCTGTTGGAAGAGACAATTGAATCCACAATTGAAGAGAAAGACTTGGAGAAAAGAGAAAACGGGGAGCTATTTGAATTGAAGATGGCCTTGCAATTGGGAAGAAGTGTGTCACAGCTGAGAGAACTTGCTTCAAAATCTGCTGCATATCGCATGGAAGGAAGGGAGATTGATGAATTCGCCAGCAAACTCTTCTAA 1293 0.4339 MSSLRFSILNNYPLHSSPSSSSFKRINSSINLPKLPQVSSSVPKLLSSSSSSSSSTRTMVEELAKFRVTDNYKSSFVEKNHTNKILHDTNSEAIIQLYAILEAVVDRIEMHTNVGEQRNNWNTLVLNSINMLTLTASTMAGVAGTATGEGAPLFALKLSSALLFSAATGMLLATNKIQPSQLAEEQRNAARLFKQLQAQIQTTIAVGNPSESDVRGAMERVLALDKAYPMPLLGGAMLEKFPEKFEAARWWPESRLNNEKAQTKVKSNNGWSMELEEEMREVIEVVKRKDMEDYERLGNIALKINKGLAISAPLLTGIAALGCVFSGDGLVPVVAGALASVVNALEHGGQVGMVFEMYRNCGGFFQLLEETIESTIEEKDLEKRENGELFELKMALQLGRSVSQLRELASKSAAYRMEGREIDEFASKLF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01111 430 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 16 430 IPR027949 -
Vimu2g01111 430 Pfam Petal formation-expressed 96 406 IPR027949 -
Vimu2g01111 430 Coils Coil 365 385 - -
Vimu2g01111 430 Coils Coil 182 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01111 Vimu-Chr2 7362113 7363405 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01111 - - gmx:100800558 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01111 2 7362113 7363405 Vimu2g01111 2 7362113 7363405 ECH
Vimu7g02039 7 18272698 18275150 Vimu2g01111 2 7362113 7363405 PCT