Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02038 ATGGCTTCTTTACAGACCACACCTCTCCTTTCTTCTTCTCTAACAAAAATCAACGCTTCTATTCGTCTCCCTAACCCTCCACAACTCTCTCATTCTCTCCCAAAGCTACCATCAACAACACTGCGCATTGATCAACTTAATGGCTCCACACGCACAATTCCATTGGAGAACAATGTCGTTACCACACACATATATCAAGATTTATTCACTCCCACCGACACATCATCTAATAGCCTCACTCCTCAACTCTACGCAATTTTGGAGCAAGTTTCTGACAGAATTGAAATGCACAAAAACATTGGCGAACAGAGAAACAACTGGAATACTCTTCTTCTTAATTCCGTCAACATGATCACTCTCACTGCCACAGCCATGGCTGGTGTTGCTGCAGCCACCACTGGTGACACCGGGGCACCGCTTTTGGCCTTGAAACTATCATCAACGCTCTTGTTTTCTGCCGCCACAGGGATGTCACTCATCATGAACAAAATTCAGCCCTCACAACTCGCCGAGGAGCAACGCAATGCTACAAGGTTGTTTAAAGAGCTTCATACCCAAATCCAAACCCTAATCACTATTGGAAATCCCACAGAGAAAGACGTGAAGAGTTCAATAGAGAAGGTGTTGGCACTCGACAGAGCTTACCCACTTCCCTTATTGGGAGCCATGCTTGACAAGTTTCCCCAAAAACATGAACCTGCGGTCTGGTGGCCTTCGTCTCAGTCTCAGAGAAAAAGTACAACACAAGAGAGGAAAAGGTCTAATAATGGATGGAGTGAAGAGCTTGAAAAGGAGATGAGGGAAGTGATCGAAGTGATAAAGAAGAAAGACAGTGAGGACTATGAGAGGCTCGGAAACATAGCGTTGAAGGTGAGCAAGAGTCTTGCAATTGCGGGGCCTTTACTGAGTGGGATTGCAGCAGTGGGGTCTTCTTTTGTGGGGAATGGCTCATTGGCTGCATTAGTGCCTCTCATGGCTGGCTCATTGGCTTCAGCTGTTAATGCATTCGAGCACGGTGGCCAAGTGGGCATGGTGTTCGAAATGTACAGAAACTGTGGTGGATTCTTCACGCTTTTGGAAGAGACCATTAGGGACACTCTTGAAGAGAAAGACACTGAGAAAAGAGAAAACGGTGAAGTTTTTGAAATGAAGGTGGCAATGAAGTTGGGAAGAAGCGTTTCGGGGCTGAGACGCCTTGCCTCAAAATCTGCTTACTGTGGTGTGGAAGGAATTGTCGTCGATGAATTCGCCAGCAAGCTCTTCTAA 1266 0.4621 MASLQTTPLLSSSLTKINASIRLPNPPQLSHSLPKLPSTTLRIDQLNGSTRTIPLENNVVTTHIYQDLFTPTDTSSNSLTPQLYAILEQVSDRIEMHKNIGEQRNNWNTLLLNSVNMITLTATAMAGVAAATTGDTGAPLLALKLSSTLLFSAATGMSLIMNKIQPSQLAEEQRNATRLFKELHTQIQTLITIGNPTEKDVKSSIEKVLALDRAYPLPLLGAMLDKFPQKHEPAVWWPSSQSQRKSTTQERKRSNNGWSEELEKEMREVIEVIKKKDSEDYERLGNIALKVSKSLAIAGPLLSGIAAVGSSFVGNGSLAALVPLMAGSLASAVNAFEHGGQVGMVFEMYRNCGGFFTLLEETIRDTLEEKDTEKRENGEVFEMKVAMKLGRSVSGLRRLASKSAYCGVEGIVVDEFASKLF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02038 421 Coils Coil 259 279 - -
Vimu7g02038 421 MobiDBLite consensus disorder prediction 235 259 - -
Vimu7g02038 421 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 1 421 IPR027949 -
Vimu7g02038 421 Pfam Petal formation-expressed 82 397 IPR027949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02038 Vimu-Chr7 18266724 18268482 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02038 - - gmx:100794664 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02038 7 18266724 18268482 Vimu7g02038 7 18266724 18268482 ECH
Vimu7g02038 7 18266724 18268482 Vimu2g01112 2 7367857 7369092 PCT