Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01112 ATGGCTTCCATACAAACCTCGTCTCTACTTTCTTATTCTTCCTTGTCTTCAAGGAAAACAATAAATGCTGCAATCCACGTCCCAAAACTCCCGAGAGTTGATGTTTCACTGCCAAAGATACGTATTATAAAGAAGGCTGAGGAATCGAAACCCAGAGACATAACCCCATTGTCTGAGAAGAATACGCAGCATTCTACAAACTCCGATGCCCTTATCAAACTCTGTGCAATCCTCGAAGCTGTGGCTGACAGGGTTGAAATGCACAATAACATTGGCGAGCAACGTGATAACTGGAACACGCTGCTTTTGAACTCCATTAACATGATTACACTCACTGCAACAACCATGGCTGGTGTTGCAGCCACGTGTGGAGCTGATGCACCACTTTTGGCTTTGAAGCTTTCTTCTGCGCTGTTGTTTTCAGCAGCCACAGGGATGTTGCTCATCATGAACAAGATCCAACCATCTCAACTCACGGAGGAACAACGGAATGCTTCTAGATTGTTCAGGAACCTTCAGAGCGAAATCGAAAGCACAATTGCACTTGGAAACTCTACCGAGGAAGATGTGAAGGGTGCAATTACGAGGGTTTTGGCGCTTGACAAAGCTTTTCCACTTCCCTTGTTGGGAGGAGCTATGCTTGAGAAATTCCCTGAGAAGTTTGAGCCTGCTGTGTGGTGGCCTTCCAAAGTGTGCGAGGGAAAAGGAAAGCCACAGAGAATGGGAAAAACGAATGGATGGAATGAGGAACTAGAAATGGAAATGAGGGAGGTTATTGAGGTGGTGAAGAGAAAAGACAGTGAGGACTATGAAAGGCTTGGGAACATAGCGTTGAAGGTTAACAAGATCATGGCCATTTCAGGTCCTTTACTGACAGGAATTGCAGCAGCAGGATCTGCATTTGTAGGGAATGATTCTTGGTTGTCATTAGTGCCTCTGATGGCCGGGTCATTGGCTGCAGTAGTTAACAGTTTTGAGCATGCAGGGCAAGTAGGCATGGTTTTTGAAATGTACAGAACCTCAGGTGGGTTCTTCAAGATGCTGGAAACCTCTGTTGAATCAACTTTGGAAGAGGAAGATTTGGAGAGAAGAGAAAATGGGGAGCTGTTTGAAATGAAGATGGCTTTGAAGTTGGGAAGAAGTGTGTCACAACTGAGGGAACTTGCTTCTAAATCAACTTCTTATCGCATGGAAGGAGTGTTTGAAATAGACGAATTTGCTAGCAAACTGTTCTGA 1236 0.4482 MASIQTSSLLSYSSLSSRKTINAAIHVPKLPRVDVSLPKIRIIKKAEESKPRDITPLSEKNTQHSTNSDALIKLCAILEAVADRVEMHNNIGEQRDNWNTLLLNSINMITLTATTMAGVAATCGADAPLLALKLSSALLFSAATGMLLIMNKIQPSQLTEEQRNASRLFRNLQSEIESTIALGNSTEEDVKGAITRVLALDKAFPLPLLGGAMLEKFPEKFEPAVWWPSKVCEGKGKPQRMGKTNGWNEELEMEMREVIEVVKRKDSEDYERLGNIALKVNKIMAISGPLLTGIAAAGSAFVGNDSWLSLVPLMAGSLAAVVNSFEHAGQVGMVFEMYRTSGGFFKMLETSVESTLEEEDLERRENGELFEMKMALKLGRSVSQLRELASKSTSYRMEGVFEIDEFASKLF 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01112 411 Coils Coil 248 268 - -
Vimu2g01112 411 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 1 411 IPR027949 -
Vimu2g01112 411 Pfam Petal formation-expressed 73 386 IPR027949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01112 Vimu-Chr2 7367857 7369092 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01112 - - gmx:100797519 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01112 2 7367857 7369092 Vimu2g01112 2 7367857 7369092 ECH
Vimu7g02038 7 18266724 18268482 Vimu2g01112 2 7367857 7369092 PCT