Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01998 ATGAAACCTCTCCAGTGCCTTATTCCTTTGATGTTTGTTCTATTTGCTTTCGCGGTTGCAAGGAAGGACAATATGGGCGGAGGGTGGAGTCCCATCAAGAACATCAACGATCCTCACGTAAAGGAGATAGCAGATTACGCCGTTACGGAGTATGACAAGCGATCGGGTCATAAATTGAAGTTGGAAAAGGTATTGAAGGGCGAGACTCAGGTAGTTGCAGGGGTCAACTACCGCCTTACCGTGGCGGCCGCCGACGGTTCTTCTTCCAACAACTACGAAGCAATTGTGTGGGAGAAATCGTGGCAGCATTTCAGGAACCTCACTTCCTTTACCCCTGTAGAGTTTTCTGAAATGAAGATCTGCGTTTTCAATGTTTTCTTTGGTAGGAGGGTAAGAGAAGAAGAAGCGGAGATAGGAGTGTGCGTGTCCAAACCCAAGGGGCCTAAGAGGGGCTCTTCGTCGGAGGCGGTGGTTTTTTCCCCTCCGGATTCCCCCACCATGAAGAGCCTCTTTAAGTCCAAGCCCCGCACTCCCTCCGACATCGTTCGACATACTCGAGATCTTCTCCGCCTCACCAACCGCGATGACGACAAGACGGCCGAACTCACCAAAAACCTCCGGGAGATGAAGTCAATTCTCTATGGGAACAGCGAATCCGAACCGGTCCCCGAGGCTTGTGCCCAGCTCACTCAGGAATTCTTCAAGGAAAACACCTTGCGTCTTCTTATCCAATGTCTTCCCAAGTTAAACTTGGAGGCTCGGAAGGATGCCACTCAAATTGTTGCGAATTTACAGAGGCAGCAGGTTCAGTCTAAGCTCATCGCGTCCGATTACTTGGAGACAAATTTGGATCTCATGGATGTTTTGATATCTGGCTACGAAAACATGGACATGGCTTTACACTACGGTGCGATGTTGAGAGAGTGCATAAGACACCAGATTGTTGCGAAATATGTTCTGGACTCACCTCATATGAAGAAGTTTTTTGACTACATTCAACTTCCAAATTTTGACATAGCTGCAGATGCTGGGGCAACTTTTAAGGAGCTCTTGATGAGGCATAAATCTACAGTTGCCGAATTCCTTTCCAAGAATTATGATTGGTTTTTTGATGAATATAACTCTAAGCTGTTGGAATCTTCCAATTATATTACAAGGCGTCAAGCTGTCAAGGTGCTGGGAGATATGTTACTTGATCGCTCAAATTCAGCTGTCATGACACAATATGTCAGCTCACGAGATAACCTAAGGATTTTAATGAATCTTCTACGAGAGTCAAGCAAGAGCATTCAGATTGAAGCATTTCATGTTTTCAAGCTTTTTGTTGCTAACCAAAAGAAACCAGCTGATATCATCAGCATACTTGTTGCAAACAGAAGCAAGCTTCTTAGACTTTTGGGTGACTTAAAAATAGCTAAAGAGGATGAACAGTTTGAAGCTGACAAAGCTCAAGTTATAAGAGAAATTGCAGCTCTTGAACCGAGAGATATTGCTTGA 1497 0.4509 MKPLQCLIPLMFVLFAFAVARKDNMGGGWSPIKNINDPHVKEIADYAVTEYDKRSGHKLKLEKVLKGETQVVAGVNYRLTVAAADGSSSNNYEAIVWEKSWQHFRNLTSFTPVEFSEMKICVFNVFFGRRVREEEAEIGVCVSKPKGPKRGSSSEAVVFSPPDSPTMKSLFKSKPRTPSDIVRHTRDLLRLTNRDDDKTAELTKNLREMKSILYGNSESEPVPEACAQLTQEFFKENTLRLLIQCLPKLNLEARKDATQIVANLQRQQVQSKLIASDYLETNLDLMDVLISGYENMDMALHYGAMLRECIRHQIVAKYVLDSPHMKKFFDYIQLPNFDIAADAGATFKELLMRHKSTVAEFLSKNYDWFFDEYNSKLLESSNYITRRQAVKVLGDMLLDRSNSAVMTQYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFVANQKKPADIISILVANRSKLLRLLGDLKIAKEDEQFEADKAQVIREIAALEPRDIA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01998 498 MobiDBLite consensus disorder prediction 148 178 - -
Vimu7g01998 498 Pfam Mo25-like 170 492 IPR013878 -
Vimu7g01998 498 SUPERFAMILY ARM repeat 176 494 IPR016024 -
Vimu7g01998 498 FunFam putative MO25-like protein At5g47540 169 492 - -
Vimu7g01998 498 PANTHER CALCIUM-BINDING PROTEIN 39-RELATED 167 493 IPR013878 -
Vimu7g01998 498 Gene3D - 19 117 - -
Vimu7g01998 498 SMART CY_4 24 113 IPR000010 GO:0004869
Vimu7g01998 498 CDD CY 27 112 IPR000010 GO:0004869
Vimu7g01998 498 SUPERFAMILY Cystatin/monellin 25 113 IPR046350 -
Vimu7g01998 498 Gene3D - 168 492 IPR011989 -
Vimu7g01998 498 Pfam Aspartic acid proteinase inhibitor 32 112 IPR000010 GO:0004869
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01998 Vimu-Chr7 17953338 17959001 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01998 K08272 - gmx:100788031 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01998 7 17953338 17959001 Vimu2g01184 2 7898246 7903476 PCT