Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01184 ATGAAGGGTCTCTTTAAGTCTAAACCTCGCACTCCTGCAGATGTAGTGCGTCACACCAGAGATCTTCTACTCTTCGTTGATCGGAACTCCGAATCCCGCGAAAGCAAAAGAGAAGAGAAGCAAATGTCCGAGCTATTTAAAAACATCAGGGAGCTTAAGCAAATCCTGTATGGAAATAGTGATTCTGAACCAGTTGCGGAAGCTTGTGCACAGTTGACTCAGGAGTTCTTTAAGGAGGACACATTGCGACTGTTTATCAAATGTCTTCCAAAATTGAATCTGGAGGCCAGAAAAGATGCCACTCAAGTTGTTGCAAATTTACAAAGGCAACAGGTTCAGTTTAAGTTGATTGCATCTGATTACCTGGAAAAAAATCTGGATCTTATGGATGTCTTGATAGTTGGCTATGAAAACACAGATATGGCTTTACACTATGGTGCAATGCTAAGGGAGTGTATACGACATCAAATTGTTGCAAAATATGTTCTCAACTCACCACTTATGAAGAAATTCTTTGACTATATCCAACTCCCGAATTTTGACATTGCTGCCGATGCTGCGGCTACCTTTAAGGAGCTCTTGACAAGACATAAATCTACTGTAGCCGAATTCCTTTCCAAGAATTATGAATGGTTTTTTGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTATATTACAAGGCGCCAAGCTGTCAAGTTGTTGGGAGATATATTACTTGACCGTTCAAATTCAGCAGTAATGACACGATATGTGAGCTCAAGAGACAACTTGAGGATTTTAATGAATCTTCTAAGAGAGTCAAGCAAGAGCATACAAATCGAAGCATTTCATGTTTTCAAGTTATTTGCTGCTAACCAACATAAACCAGCTGATATCGTCAGTATATTTGTCGCAAACAAAAGTAAGATGCTGAGACTATTGGAAGACTTCAAAATTGATAAAGAGGATGAACAATTTGAAGCTGACAAAGCTCAAGTGATGAAGGAAATCGAAGCTCTTTAA 1008 0.3889 MKGLFKSKPRTPADVVRHTRDLLLFVDRNSESRESKREEKQMSELFKNIRELKQILYGNSDSEPVAEACAQLTQEFFKEDTLRLFIKCLPKLNLEARKDATQVVANLQRQQVQFKLIASDYLEKNLDLMDVLIVGYENTDMALHYGAMLRECIRHQIVAKYVLNSPLMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYEWFFAEYNTKLLESSNYITRRQAVKLLGDILLDRSNSAVMTRYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQHKPADIVSIFVANKSKMLRLLEDFKIDKEDEQFEADKAQVMKEIEAL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01184 335 Gene3D - 3 335 IPR011989 -
Vimu2g01184 335 Pfam Mo25-like 4 335 IPR013878 -
Vimu2g01184 335 PANTHER CALCIUM-BINDING PROTEIN 39-RELATED 1 334 IPR013878 -
Vimu2g01184 335 SUPERFAMILY ARM repeat 10 335 IPR016024 -
Vimu2g01184 335 FunFam putative MO25-like protein At5g47540 3 335 - -
Vimu2g01184 335 Coils Coil 35 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01184 Vimu-Chr2 7898246 7903476 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01184 K08272 - gmx:100817060 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01184 2 7898246 7903476 Vimu2g01184 2 7898246 7903476 ECH
Vimu7g01998 7 17953338 17959001 Vimu2g01184 2 7898246 7903476 PCT